Lactobacillus acidophilus NCFM: LBA0421
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Entry
LBA0421 CDS
T00231
Symbol
mutS
Name
(GenBank) mismatch repair protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
lac
Lactobacillus acidophilus NCFM
Pathway
lac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LBA0421 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lac03400
]
LBA0421 (mutS)
DNA repair and recombination proteins [BR:
lac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LBA0421 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Apolipoprotein
AAA_22
DUF6468
Nsp1_C
SelO
Rad33
Motif
Other DBs
NCBI-ProteinID:
AAV42312
UniProt:
Q5FLW2
LinkDB
All DBs
Position
397104..399461
Genome browser
AA seq
785 aa
AA seq
DB search
MNNKILKILEFGEITDRLGALAITSPAKERAEKLLPSSDFDQVQNDIKQTLALTNLLRIK
GQLPLTNFKDVRPSTKRLGVKANLNAQELGNLLLVLSLAQEINEFLEDVDEKVDLTIIDP
ILDQLDVPDLLFRELKKSIDYDGEVLDTASSELARLRHDIASNEEDIKNRMTTYTKGNSS
KYLSEQIVTIRDDRYVIPVKQEYRAKFGGVVHDQSASGQTLFVEPEAVLNLNNRQQNLIA
KEKQEIRNILKHLSNIAREDIDSLNNIASALTSLDFLQAKAKLAKEMKASEPKLTKDHSL
NLRNARHPLINPEKVVPNNIRLGGDFDTMLITGPNTGGKTITLKTAGLLQLMAQSGLFIP
AEEDSQVGVFEQIYADIGDEQSIEQSLSTFSSHMNDIIAIMKNVNSETLVLIDEIGAGTD
PEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGYNRPRTTNASMEFDLKTLSPTYRLQ
IGIPGHSNAFAIARRLGMREDVVKNAQELMSDEDSDINKMIAKLNAQTKAATTARNRLET
SLDRSQKLEQKLQQALDWYNQRVQKQLDFAQERANEIIAKRRKKADKIIEQLEQQKNVGI
KENKIIEAKGELNSLERQANNLAHNKVLQREKRRHHVSIGDRVKVLSYGQTGTITKQLSE
HEYEVQMGIIKVKVSDRDVERIDNSQSTAKPKRLVRATSAVRRSNAHSELDLRGQRYDEA
MTNLDRYIDSVLLAGLDTVTIIHGIGTGAIRKGVWQYLRSSNHVKNFNYAPANEGGNGAT
IVQLK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaaattttaaaaattctagaatttggtgaaattactgatcgcttaggggcg
ttggcaattacaagtccagctaaagaaagggcggaaaagttgttgccaagtagtgatttt
gaccaagtacaaaatgatataaagcaaactttagcgttaactaatttgcttaggattaaa
ggacaattacctttaactaattttaaggatgttagaccaagtactaagcgcttgggtgtt
aaggcaaacctaaatgctcaagaattaggaaatttactcttagttttaagtttggctcaa
gaaattaatgagtttttggaagacgtagacgaaaaagtagatttaacaattatcgatcct
attttggatcaactagatgtaccagatttactttttagggaattaaagaaatcaatagat
tatgatggagaagttttagatacagcatcaagcgaattggcacggctacgtcacgatatt
gcaagtaacgaagaagacattaagaatcgaatgactacttatactaaaggcaatagcagt
aagtatttatctgaacaaattgtaactattcgtgatgatcgttacgttattcctgtaaag
caagaatacagagcaaaattcggtggtgttgttcatgatcaaagtgctagtggtcaaacc
ttatttgtagaacctgaagcagttttaaacttgaataatcgtcaacaaaatttaattgca
aaagaaaagcaagaaatccgcaatattttaaagcatttatctaatattgcacgagaagat
attgatagtctgaataatattgcttctgctttaactagcttggactttttgcaagcaaag
gcaaaattagctaaggaaatgaaggctagtgaacctaaattaactaaagatcattcatta
aatttacgtaatgctcgtcatccattaattaatcctgaaaaagttgttcctaacaatatt
cgcttaggtggcgattttgatacgatgctgattactggtcctaataccggtggtaagact
atcactttaaagactgcaggtttgcttcaattaatggcacaatctgggttgtttatcccg
gctgaagaagatagtcaagttggcgtatttgaacaaatttatgctgatattggtgatgaa
caatcgattgagcaatcacttagtacattttcatctcatatgaatgacattattgcaatt
atgaaaaatgtaaatagtgagactttggtattaatcgatgaaatcggagctggtacggat
cctgaagaaggtgctagtttagccatcagtattctggacttcttacgtaaaaaagatgct
aagattatggttacgactcactatcctgaattgaagttgtatggttataacagaccgcgt
actacaaatgcttcaatggaatttgatttgaagacgttgtcgccaacttatcgtctccaa
attggtattccaggtcatagtaacgcttttgcgattgcacgtagattagggatgcgcgaa
gatgtagtaaaaaatgcccaagaattaatgtcagatgaagattccgatattaacaagatg
attgctaaattaaatgctcaaactaaggctgcaacaactgcccgtaatcgtttagagact
agtcttgatcgtagtcaaaagttagagcaaaaattacagcaggcacttgattggtataat
caaagagtacaaaagcaacttgactttgcccaagaacgtgccaatgaaattattgctaaa
cgtcgtaaaaaggcagataagattattgagcagcttgaacaacagaagaatgttggaatt
aaagaaaataagattattgaagctaaaggtgagttgaatagtttagaacgtcaagctaat
aatttggctcataataaggtcttacagcgtgaaaaacgtcgccatcatgtaagtataggt
gacagagtaaaagtcttgtcatatggacaaacagggacgattactaagcagctatccgaa
catgaatatgaagttcagatgggtatcattaaagtcaaggttagtgatcgtgacgttgaa
agaattgataatagtcaatcaacagctaaacctaagcgtcttgttcgtgcaactagtgca
gttagaagaagcaatgctcacagtgaattagatttaagaggtcagcgatatgatgaagca
atgactaatttagatcgttatattgattcagtattgctcgcaggactcgatactgtaaca
ataattcacggtatcggtactggtgcaatacgtaaaggggtatggcaatatttgcgtagt
agcaatcatgttaaaaactttaattatgcaccagcaaatgaaggtggtaatggtgcaaca
attgttcagttaaaatag
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