KEGG   Lactobacillus acidophilus NCFM: LBA0706
Entry
LBA0706           CDS       T00231                                 
Name
(GenBank) DNA polymerase III alpha chain
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
lac  Lactobacillus acidophilus NCFM
Pathway
lac03030  DNA replication
lac03430  Mismatch repair
lac03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LBA0706
   03430 Mismatch repair
    LBA0706
   03440 Homologous recombination
    LBA0706
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lac03032]
    LBA0706
   03400 DNA repair and recombination proteins [BR:lac03400]
    LBA0706
Enzymes [BR:lac01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LBA0706
DNA replication proteins [BR:lac03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LBA0706
DNA repair and recombination proteins [BR:lac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LBA0706
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C
Other DBs
NCBI-ProteinID: AAV42581
UniProt: Q5FL43
LinkDB
Position
complement(700121..700654)
AA seq 177 aa
MNFIAMDFETANHYPESACSLALVMVRNNKIVDRFYTVINPQMPFDARNIQVHQITAEDV
KNAPTMAEVWPKIKGLYQPGMLVAAHNSRFDTNVMRQSLARYNIEEPHYLVIDTLATSKL
FEPELPNHKLDTVSDALNVELWHHHNALSDSEACAGILINQEKQFGDEAIKNLVYQI
NT seq 534 nt   +upstreamnt  +downstreamnt
atgaattttattgctatggattttgaaacagctaatcattatcccgaaagtgcctgttca
cttgcactagtaatggtgagaaataataaaattgttgaccgattttatacagtaattaat
ccacaaatgccatttgatgcccgtaatattcaagtccaccaaattactgctgaagatgta
aaaaatgcaccaacaatggcagaagtttggcctaaaattaaaggactatatcaacccggt
atgctagttgctgctcataattcccgctttgatactaatgtaatgcgtcagagtttagcg
cgctataatattgaagaacctcattatttagttattgatactttagctaccagcaagctc
tttgaaccggaattacctaatcataagctagatacagtatctgatgctctcaatgtagaa
ttatggcatcatcataatgcattaagcgatagtgaagcctgtgctggtattttaattaat
caggaaaagcaattcggtgatgaagctattaaaaatttagtctatcaaatataa

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