Lactobacillus acidophilus NCFM: LBA0825
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Entry
LBA0825 CDS
T00231
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lac
Lactobacillus acidophilus NCFM
Pathway
lac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LBA0825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lac03400
]
LBA0825
Enzymes [BR:
lac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LBA0825
DNA repair and recombination proteins [BR:
lac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LBA0825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
MCM4_WHD
SLFN-g3_helicase
Herpes_Helicase
nSTAND3
RsgA_GTPase
DEAD
WH_MCM3_C
UvrD_C
AAA_22
AAA_5
AAA_12
AAA_23
AAA_28
AAA
NTPase_1
AAA_29
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AAV42687
UniProt:
Q5FKT7
LinkDB
All DBs
Position
806021..808375
Genome browser
AA seq
784 aa
AA seq
DB search
MVEFTGRINGIVFENDKDLYKILDVEIIGSLENYSRDEIKVIGNFGDIQIGSSYRFDGKL
VMHEKFGLQFRASSYKQVLPHEEGSLTKYLSSDKFPGIGKKAANTIIDELGLNALDILKE
SPAKIDTLSLTSKQKDSLLSGLNTMDSYSEIVLKLAKYGINKRVAGKVYQLYHGDSLAKL
EKDPYVAVNEVAGFGFKTADTLGKQLDIRLDDPRRIKGAIYQVLLDALNGEGNTYVTLAD
LLTQANELLQIEQFDPIANCINELQEQGKVVVSGDTAALQNIFQTEIDIARSMKNLVQNQ
ALQENESYDDAEIEAAIEDAEDKLKIKYDGTQKLAIKNALKNPISILTGGPGTGKTTIIN
GILLALRKLAEIPAAALYSDNPPFLLAAPTGRAAKRMGEITEISAKTIHRMLGLGIGDID
TSELNELNGEILIIDEMSMVDMFLFRQLLSSINQVKHIVFVGDKDQLPSVGAGNVFSDLI
KSGAFPTAILKQIHRQGDDSTIIALAHDVNEGKDEQALFKKTKNYSFISCRPELVGDAVG
QIVELALKRGFAKDDIQVLGAMYHGNGGVNNLNDIIQDIMNPPKAKSKSIEVHNEIFRIG
DRILQLQNNPEKDIYNGQIGKIISIDENNSQKCMVANFDDREITFSKKDMNDITRAYAIT
IHKSQGSEFPLVVLNLTMQNFVMLKRNLLYTAITRAEKNLVLVGDSRAFLAAFKTAGNDR
KTGLSEKICEQLDIKTKNTSDEDEKVKEKESTEVKKESEDYILTPDKIYSGEIDPMIGMI
DIKL
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaatttaccggtagaattaacgggatcgttttcgaaaacgacaaagatttatat
aaaattttagatgtagaaattattggttcgcttgaaaattattcacgtgatgaaataaag
gtaatcggtaattttggtgatattcaaattggaagtagttatcgctttgatggtaagctg
gttatgcatgaaaagtttggcctacaattcagggccagcagttataagcaagtcttacca
catgaggaaggctctttaacaaagtatttaagctctgataaatttccaggtattggtaaa
aaagcagctaatactattatcgatgaattaggattaaatgctttagacattttaaaagaa
agcccagctaaaatagataccctgtctttaacaagtaagcaaaaagatagtttattatct
ggactgaatacaatggattcatattcggaaatagtattaaaactagctaagtatgggatt
aataaacgagttgcaggtaaagtgtaccagctctatcatggcgatagtttagctaaacta
gaaaaagatccctatgtggcagttaatgaagttgcaggttttggttttaaaacagctgat
actttaggtaaacagttagatatcagactggatgatcctcgaagaataaaaggggctatt
tatcaagtattgctagatgcattgaatggtgaaggaaatacttatgtaactttagcagat
ttattaacgcaggctaatgaattactacagattgaacaatttgatccgattgctaactgt
ataaatgaattgcaagaacagggaaaagttgttgtcagtggagatactgctgctttacaa
aatatctttcagactgaaatagatattgctcgttcaatgaaaaatttggttcaaaaccaa
gctttgcaagaaaatgaaagttatgatgatgcagaaattgaagcagcgattgaagatgct
gaagataaactaaaaattaaatatgatggtacacaaaaattagcaattaagaatgctctt
aagaatcctatttcaattttgacaggtggacctgggaccggtaaaactactattattaat
gggattttgttagcattaagaaaattggctgaaatacctgctgctgcattgtatagtgat
aatccaccattcttattggctgcccctacgggaagagctgccaaaagaatgggtgagatt
actgaaattagtgctaagacaattcaccggatgttgggtttaggtattggtgatatagat
actagtgaattaaatgaattgaatggtgaaattttaattattgatgaaatgtcaatggtt
gatatgttcttgtttagacaattattatctagcattaatcaggtgaaacatattgtcttt
gtaggtgataaagatcaattaccatctgttggagcagggaatgtttttagtgatttaatt
aaatcaggtgcgtttcctactgctattttgaaacaaattcatagacaaggcgatgattca
actattattgctttagcccatgatgttaatgaaggtaaggacgagcaggctctatttaaa
aaaacaaaaaattattcattcattagctgccgccctgaactggtgggggatgcagtaggt
caaatcgtagaattagcattaaaacgtggatttgctaaagatgacattcaagttttagga
gcaatgtatcatggaaatggtggagtaaacaatttaaacgatattattcaagatattatg
aatccaccaaaagctaagagtaaatctattgaagtccataatgaaatttttagaattgga
gatagaattttacagttacaaaataatccggaaaaagacatttataacggtcaaatcggt
aaaattatcagtattgatgaaaataattcccaaaaatgtatggtagctaattttgatgat
cgtgaaataacttttagtaaaaaagatatgaatgacataactagagcatatgcaattact
attcataaatctcagggctcagagttcccattggttgttttaaatttgaccatgcaaaat
ttcgttatgcttaaacgtaatcttttgtatacagcaattacacgtgctgaaaaaaatcta
gtacttgttggcgattcccgtgcttttttagctgcttttaaaacagcaggaaatgatcga
aagactggtttatcggaaaaaatttgtgagcaacttgatattaaaacaaaaaatactagt
gatgaagatgaaaaagtaaaagaaaaagaaagtactgaagtgaaaaaagaaagtgaagat
tatattttaacgcctgataagatatattctggtgagatcgatccaatgattggtatgata
gatattaagttgtaa
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