KEGG   Lactobacillus acidophilus NCFM: LBA1290
Entry
LBA1290           CDS       T00231                                 
Name
(GenBank) signal recognition protein Ffh
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
lac  Lactobacillus acidophilus NCFM
Pathway
lac02024  Quorum sensing
lac03060  Protein export
lac03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lac00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    LBA1290
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LBA1290
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LBA1290
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lac02044]
    LBA1290
Enzymes [BR:lac01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     LBA1290
Secretion system [BR:lac02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   LBA1290
  Eukaryotic Sec-SRP protein
   LBA1290
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin AAA_17 CbiA cobW GTP_EFTU AAA_16 AAA_33 6PF2K hnRNP_Q_AcD MMR_HSR1 ResIII AAA_28 AAA_19 AAA AAA_5 Lyase_catalyt
Other DBs
NCBI-ProteinID: AAV43120
UniProt: Q5FJK4
LinkDB
Position
complement(1267248..1268678)
AA seq 476 aa
MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA
LGKEVQESLNPGQQVIKIVNEELTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK
LAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSENGEKDVAKIVQDGLAEA
DKNKNDYVLIDTAGRLEIDEPLMEELERVKKVADPDNILLVVDAMTGQAATDVAKGFDER
LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD
MLSLIERAQQDYDAKEAQKVAEKMRENTFDFNDFVDQLQQVQKMGPLDQIMKMIPGLANN
PQLKNLSVDQKQIDHTEAIVYSMTEEERENPDILNPSRRRRIAAGSGRPVVEVNRMIKQF
KQMREMMSKVTKGNMKGLSNLPGMDSPMAKMAMRRLNKNFKKNKKKRLRKVKRYHS
NT seq 1431 nt   +upstreamnt  +downstreamnt
atggcttttgaaaatttaagtgaaagaattcaaaaagcattaaaaaatttaactggtaaa
ggtaaggtttcagaagaagatattaataaggctagtcgtgaaatcagattagctcttctt
gaagccgatgttaactttaaagttgttaaggacttcattaaaacaattaagaaagaggca
cttggtaaggaagttcaagaaagtcttaatccaggtcaacaagtaattaaaattgttaat
gaagagttgactaagatgatgggggaagaagcagtccctcttaataaatccaagcatatt
cctactattatcatgatggtaggtttgcaaggtaccggtaagactactacagtaggtaaa
cttgcatatcatctacaaaagacgcagaaagctcgtcctcttttaattgctggggatatt
taccgtccggctgccgttgaccaactaaaacaaatcggtgagcaattaaaagtgccagtc
tttagtgaaaatggagaaaaagatgttgctaaaattgttcaagatggtttagcagaggcc
gataagaacaaaaatgattatgtattaatcgatacagccggtcgtcttgaaattgacgag
ccattaatggaagagctggaacgtgtaaagaaagtagcggatcctgacaatattttactt
gttgttgatgctatgacaggtcaagcagcaaccgatgtagctaaaggttttgatgagaga
ttagatgttaccggtgttatcttgactaagcttgatggtgatactcgtggtggtgctgca
ctttcaattcgtgctgtaactggtaagccaatcctatttacaggacaaggtgaaaagtta
agtgacttggatgttttccacccagatcgaatggcttcaagaatcttgggtatgggtgat
atgctttccttaatcgaaagagcacaacaagattatgatgctaaagaagctcaaaaagtt
gcggaaaagatgcgtgaaaacacctttgactttaatgacttcgttgatcaattacaacaa
gttcaaaagatgggaccattagaccaaattatgaaaatgattccagggcttgctaataat
cctcaacttaaaaacttaagtgttgatcaaaagcaaattgatcatactgaagcaattgtt
tattcaatgacagaagaagaacgtgagaatccagatattttaaatccaagtcgtcgaaga
agaattgctgcaggttcaggtcgtccagttgttgaagtaaacagaatgatcaagcaattt
aaacaaatgcgcgaaatgatgagcaaagttactaaggggaatatgaaaggcttaagtaac
ttgccaggaatggattcaccaatggctaaaatggctatgcgccggttaaataagaacttt
aagaagaataagaagaagcgattgcgtaaggttaagagatatcattcataa

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