Lactobacillus acidophilus NCFM: LBA1296
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Entry
LBA1296 CDS
T00231
Name
(GenBank) chromosome segregation protein Smc
KO
K03529
chromosome segregation protein
Organism
lac
Lactobacillus acidophilus NCFM
Brite
KEGG Orthology (KO) [BR:
lac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lac03036
]
LBA1296
Chromosome and associated proteins [BR:
lac03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
LBA1296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
Tropomyosin
AAA_29
TMF_DNA_bd
APG6_N
WXG100
Crescentin
Motif
Other DBs
NCBI-ProteinID:
AAV43126
UniProt:
Q5FJJ8
LinkDB
All DBs
Position
complement(1273939..1277508)
Genome browser
AA seq
1189 aa
AA seq
DB search
MPLTELVLDGFKSFADKTVIHFNKGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGTN
MKDVIFAGSQYRKPMNKAEVTLIFDNKNRELAFETDQVSVTRRILRSGDSEFLINNQQVR
MRDVRTLFLDSGISPNSLAIISQGRVDQILNSRPEQRRIIFEEAAGVLHFKQQKEEAQNQ
LKKTQDNLIRINDLVKELESRLEPLNEQSSLAKEYKFQKSGLDKKLKSLLAFEIENINQQ
REDIQKSADKNKILLAKLDDEVKDSQAAVTQKRAEYKKLRDERDHTQNKLLKLSKDLSEL
NASLQMAEQSRQFDDATKEEYKNQVKQLKQNLVQLKADLDELKKEKKKLQDEQDVLKIER
GQLTGELNEDPEELNKKLDDIRNNYMQLLQDQATTNNQIVNLNSDLRRSQADTTYQTGDV
SKQLTDAQKQLEQLRIEGKKLTDKRQKEQNAIVRINKQNNQLNTELTNLRQVVNAERNEL
EKVEARHEALVNIQKRHEGYYYGVRNVLNHLNDFAGVIGAVGELITFPAELEAAMTTALG
GGVQDLITESRISARNAINKLKQNHGGRATFLPLDGLRQYGIPQSTVTTLKSYDGFRGIA
SDLVESKTDQDITAAINYLLGSVVIVDTIDTAMSVAQRVNRYRIVTLDGDVISPGGSMTG
GQRNQRSNSPLQTATEINQLEKQIKTLKQNLNEDQDKLENLVDQSNKVNAELQDLQDALR
ETSQAINEAAISFQGQEKEVKRLLDANTLYKSRIKDRNDRIELLKKQIKEANDKQMLLTK
QGEEQKAKMNDLQDKIKNFNNLSQRIQDELSKLDPKIAVYTNKLENLSSQENEKNHQIDN
SEKQIEDLTAKLTILAQNDENSMNQTANLEKQKSTIEQKNNELQARLNDLSSQLGQFDAQ
INQLDQVASRNYDLRKDAAIEQEDYSVKIAKFNSSINQRLETLRDDYSLTFEAAIAQAEG
ENNEETRNELAKSVKLHRMSIEDIGPVNLDSIQEYEDVKQRYDFLNGQQNDLLKARDDLE
KSMTELDDEVKTRFKHTFDTIAESFQKIFPVVFGGGKAKLELTEPDNLLETGIEIIAQPP
GKKLQRLSLLSGGERALTAITLLFAMLQVNPVPFCVLDEVEAALDDANVARFAEFLLKYD
MKTKFIVITHRRGTMRQADQLYGVVMQESGVSQVVSVSLKEMKDKHEVN
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
gtgccattaacagaattagtgctagatggatttaaatcattcgctgataaaacagttatt
cattttaataaaggaataactggtattgtaggaccaaacggaagtggtaaaagtaacatt
acagaagctattcgctgggtaatgggtgaatcaagtgctaaatcacttcgtggaactaac
atgaaagacgttatttttgccggaagtcaatatagaaaaccaatgaacaaggcagaagta
acccttatctttgataataaaaatcgtgagcttgcttttgaaaccgatcaagtttctgta
actagaagaattttacgttcgggagatagtgaatttttaataaataatcagcaagtacgt
atgcgagatgttcgtactcttttcctagattcaggaatttcgccaaatagcttggcaatt
atttcacaaggacgggtcgatcaaatattaaattcacgtccggaacaaagaaggatcatc
tttgaagaagctgcgggtgttttacattttaaacaacaaaaagaagaagcgcagaatcag
cttaaaaagacccaagataatttaattagaattaatgacttggttaaagaacttgaatcg
cgattagaaccacttaatgaacaaagttcgttagcaaaagaatataaatttcaaaagtct
ggtttagataagaaacttaaaagtttattggcatttgaaattgagaatattaatcaacaa
agagaagatattcaaaagtctgctgataaaaataagattctcttggctaaactagatgat
gaggttaaagattctcaagctgcagtcactcaaaaaagagccgaatataaaaaattacgt
gatgagagagatcatacacaaaataaattgttgaaattgagtaaggacctctcagaattg
aacgctagtttgcaaatggcggagcaatcacgtcagtttgatgatgctactaaggaagaa
tataaaaatcaagttaagcagttaaagcaaaatttagttcaactaaaagccgatttagat
gaattgaaaaaagaaaagaaaaagcttcaagatgaacaagatgttctaaaaattgaacgt
ggacaacttactggtgaactgaatgaggatcctgaagaattaaataaaaagttggatgat
attcgaaacaactacatgcaactacttcaagatcaagctacaacaaataaccaaattgtt
aatttaaattcggatctaagaagaagtcaggcagatacaacttatcaaactggtgatgtt
tctaagcaattgactgacgcacaaaagcagttagaacaacttcggatagaaggtaaaaaa
ttaactgacaagcgtcaaaaagaacagaacgctatagttagaataaataaacaaaataat
cagctaaatacagaattgactaatcttcgtcaagtagttaatgcagaacgtaatgaactt
gaaaaggttgaagctcgtcatgaagctttagtaaatatccaaaaaagacatgaaggctat
tactacggcgttcgtaatgtgttaaatcatctgaatgactttgcaggtgtaattggtgca
gtgggtgaattaattacatttccggctgaacttgaagctgcaatgactactgcattaggt
ggtggggttcaagacttgatcactgaaagtagaattagtgctagaaatgcaattaataaa
ctgaagcaaaatcatggtggtcgtgctacatttttaccattagatggtttgcggcaatac
ggaattcctcaatcaactgttactactttaaagtcttatgatggttttagaggaatagcc
agtgatttggtggagagtaaaactgaccaagatattactgcggcaataaattatttattg
ggaagcgttgttattgtagatacaatagatactgcaatgtcagttgctcaacgagtaaat
cgttatagaatagttacgcttgatggggatgttatttcacccggtggttcaatgaccggt
ggacaaagaaatcagcgtagtaattcaccattgcagactgcgactgaaatcaatcagctt
gaaaaacaaattaaaactttaaagcaaaatcttaatgaagatcaagataaacttgaaaat
ctagttgatcaaagtaataaagtaaatgctgaattacaagaccttcaagatgctttacgt
gagaccagtcaagcaattaatgaggcagcaatttctttccaaggacaagaaaaagaagtt
aagcgactgctggatgctaacactttgtataaatcacgaattaaagatcgaaatgatcga
attgaattattaaagaagcaaatcaaggaagctaatgataaacaaatgcttttgactaag
caaggtgaagagcaaaaagcaaaaatgaatgatttgcaggataagattaagaactttaat
aatttaagccagcgtattcaagatgaactgtctaaattagatcctaagattgcggtttat
actaataaacttgaaaatttatctagtcaagaaaatgaaaaaaatcatcaaattgataat
agtgaaaagcagattgaagatttaacagccaagttgactattttggcgcaaaacgatgaa
aattcaatgaatcaaactgctaacttagaaaaacagaaatccacgattgaacaaaaaaat
aatgaattgcaagctagacttaacgatctaagttcgcaattaggccaatttgacgcacaa
attaatcaattagaccaagtagccagtcgaaattatgatttacgtaaagatgctgctatt
gagcaagaagactattcagttaaaatagctaaatttaatagttcaattaatcaaagactt
gaaactttacgtgatgattattctttaacttttgaagcagctattgctcaagctgaaggt
gaaaataatgaagagactcgtaatgagttagctaaaagcgtaaaattacatcggatgtca
atcgaagatataggtcccgtgaatttagattcgattcaagaatatgaagatgtaaaacag
cgatatgactttttgaatggtcaacaaaatgatttgcttaaggcacgtgatgatcttgaa
aagtcaatgactgaacttgacgatgaagttaaaacacgttttaagcatacttttgatacc
attgctgaaagttttcaaaagatttttccagtggtattcggtggtggtaaggctaaactg
gaattaactgaaccagataatttacttgaaacaggaattgaaattattgctcagccacct
ggtaagaagttacaacgattaagtttgctttctggtggtgaacgtgcattaactgcaatt
actttgttatttgcgatgcttcaagtaaatcctgtaccattctgtgtgctagatgaggta
gaagctgcacttgatgatgccaatgttgcacgttttgcggaatttttgcttaaatatgat
atgaagacaaagtttattgtcataacacatagaagaggaactatgcgacaagctgatcaa
ctatatggtgtggtcatgcaagaatctggtgtttctcaagtagtgtcagtatccttaaaa
gaaatgaaagataaacatgaggtgaactaa
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