Lactobacillus acidophilus NCFM: LBA1306
Help
Entry
LBA1306 CDS
T00231
Symbol
oppD
Name
(GenBank) oligopeptide ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
lac
Lactobacillus acidophilus NCFM
Pathway
lac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LBA1306 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lac02000
]
LBA1306 (oppD)
Transporters [BR:
lac02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LBA1306 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
nSTAND3
RsgA_GTPase
NPHP3_N
NB-ARC
AAA
AAA_29
Sigma54_activat
AAA_17
nSTAND1
PRK
NTPase_1
NACHT
CbiA
DUF87
AAA_16
AAA_5
ATPase_2
AAA_23
DUF5906
Motif
Other DBs
NCBI-ProteinID:
AAV43135
UniProt:
Q5FJI9
LinkDB
All DBs
Position
complement(1286624..1287655)
Genome browser
AA seq
343 aa
AA seq
DB search
MEKQSDLLLDIQHLHTAYRLQGKFYDAADDINLTLKRNEILAVVGESGCGKSTIAASIIG
LYDHKNTKVTGDILYNELNLVGLNESLFNKIRGDKIGMIFQDPLASLNPLMRVGDQVAET
LYYHTDMDEKARHARVIELFNQVGMPRPEEMYEMYPHELSGGLRQRVVIAMAIACKPEVI
IADEPTTALDVTIQAQILDLLEDIQKQSHSGIILITHDLGVVAETADEVAVMYAGQIVEK
ADVKTIFENPLHPYTRSLLNSMPQSDDTDEDLHVIHGTVPSLKNMPRSGDRFAARIPWIP
ASAHEKDPQVHEVAPGHWVRCTCWKSFHFENEDNTQKVTASGE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaagcagagtgatctattactagatatccagcacctgcatacggcgtaccgtttg
caagggaaattctatgatgctgcagatgatattaatttaactttgaagcgtaacgagatt
ttagctgttgtaggtgaatctggttgtggtaaaagtactattgctgcaagtatcattgga
ttgtatgaccataaaaacactaaagttacaggggacattctttacaatgaattaaacctt
gttggcttaaatgaatctttatttaataaaattcgtggggataagatcggaatgatcttt
caagatcctctagccagtttgaatccattgatgcgtgtaggtgatcaagttgctgaaaca
ctttattaccatactgatatggatgaaaaggcacgtcatgcacgtgtaattgaattgttt
aatcaagtaggaatgccaagacctgaagaaatgtatgaaatgtatccacatgaactgtca
ggtggacttcgtcagcgtgtagttattgccatggctattgcatgtaagccagaagttatt
attgctgatgaaccaactactgctttggatgtaactattcaagcacagattttggacttg
cttgaagatattcaaaagcaatcacattcaggtattattttgattacacacgacttaggt
gttgtagctgaaacagccgatgaagttgcagttatgtatgctggtcaaattgtggaaaaa
gcggatgtaaaaactatttttgaaaatccacttcatccatatacaagatcacttcttaat
tcaatgcctcaatcagatgatactgatgaagatcttcatgttatccatggaactgtacca
tcgcttaaaaatatgccacgtagtggtgatcgttttgctgcgagaattccttggattcct
gcaagtgctcatgaaaaggatccacaagtacatgaagttgcaccaggacactgggtaaga
tgtacttgctggaaatcattccactttgagaatgaagataatacgcaaaaggtaacagca
agtggggagtag
DBGET
integrated database retrieval system
