Lactobacillus acidophilus NCFM: LBA1331
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Entry
LBA1331 CDS
T00231
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII (large subunit) EX7L
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lac
Lactobacillus acidophilus NCFM
Pathway
lac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LBA1331 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lac03400
]
LBA1331 (xseA)
Enzymes [BR:
lac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LBA1331 (xseA)
DNA repair and recombination proteins [BR:
lac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LBA1331 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Zw10_N
Motif
Other DBs
NCBI-ProteinID:
AAV43158
UniProt:
Q5FJG6
LinkDB
All DBs
Position
complement(1308691..1310058)
Genome browser
AA seq
455 aa
AA seq
DB search
MAENKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNSHQYFSLKDEKSKINVV
MFRSYFDKVKFKPEEGMKVYVTGYVSVYGPQGSYQFYAENMEPAGLGALYEQLKQLQVKL
AKEGLFNPEHKKKIPRFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGDTA
AESLVRAMRQIAAEGDKYDVMIIGRGGGSLEDLWPFNEEEVVRQVYNMQMPVISSVGHET
DTTLCDLVADARAATPTAAAEYATPNLMDELAGIHQLQSRLFSSMQTIIRQKRDRLNRIQ
NSIIMREPTRLYDQQIETVDRLKQRLQNSMQNKLDHSKQDYRLLNQRLFAVNPDKQINQM
KQQRLFLAKRLSDNMQHYLKDKRNIFAQIVQQLDDYSPLKTLERGFVYTTDRDGKTISSV
KQVNKNDSLNLHFKDGQVAAKVVEVKEEKNANEEK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaataaatatttaacggttacagatttaaattattatattacgcaaaaattt
aaaaatgatccgtacttgcacaaggtatttttgcaaggggaattatctaattttcgttat
cggcgtaattcgcaccagtatttttcattaaaagatgaaaaatcaaaaattaatgtagta
atgtttcgttcctattttgataaagttaaattcaaacctgaagagggaatgaaggtttat
gttactggttatgtaagtgtatatggtccgcaaggatcttatcagttttatgcagaaaat
atggagcctgcaggcttaggtgctttgtatgaacaattaaagcaacttcaggtcaaattg
gctaaagaaggattatttaacccagaacataaaaagaaaatacctcgttttccagataga
attgctgtcgttacaagtgcatctggagccgtaattcacgatataatggtaactgctaat
cggcgtttcccacatgctgaaattgatttgtttccagctcaagttcaaggtgatactgca
gcagaatctttagtaagagcaatgcggcaaattgctgctgaaggagataaatacgatgta
atgattatcggacgtgggggtggatctcttgaggatctatggccatttaacgaagaagaa
gtagtgcggcaagtttataatatgcaaatgccagttatttcttcagtagggcatgaaaca
gatactacattatgtgatttggtggccgatgcgcgcgctgctacaccaactgctgcagca
gaatatgctactcctaatttaatggatgaattagctgggattcaccaattacagagtcgt
ctattttctagtatgcaaactattattcgtcaaaagcgtgatcgacttaatcgaattcaa
aattctattattatgcgagaacctacacgactttatgatcagcaaatagaaacagttgat
cgtttaaagcagcgtttgcaaaatagtatgcaaaataagttagatcattcaaagcaagat
tatcgcttgttaaaccaaagattatttgcggtaaatccagataagcaaattaatcaaatg
aagcaacaaagactctttttggccaagcgcttatctgataatatgcaacattatttaaaa
gacaaaaggaatattttcgcgcagattgttcaacaactggatgattatagtccactaaaa
acattagagcgaggatttgtttatactactgatcgtgatggaaagacaattagttccgtt
aaacaagttaataaaaatgattctttaaatcttcactttaaagatggtcaagttgcggca
aaagttgtagaagtaaaggaagaaaaaaatgccaacgaagaaaaataa
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