Lactobacillus acidophilus NCFM: LBA1379
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Entry
LBA1379 CDS
T00231
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit (glutamine-hydrolyzing)
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lac
Lactobacillus acidophilus NCFM
Pathway
lac00220
Arginine biosynthesis
lac00240
Pyrimidine metabolism
lac00250
Alanine, aspartate and glutamate metabolism
lac01100
Metabolic pathways
lac01110
Biosynthesis of secondary metabolites
lac01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lac00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LBA1379 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LBA1379 (carB)
00220 Arginine biosynthesis
LBA1379 (carB)
Enzymes [BR:
lac01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LBA1379 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
GARS_A
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AAV43204
UniProt:
Q5FJC0
LinkDB
All DBs
Position
complement(1356204..1359392)
Genome browser
AA seq
1062 aa
AA seq
DB search
MPKRKDIHKIMVIGSGPIIIGQAAEFDYSGTQACLALREEGYQVVLVNSNPATIMTDTTI
ADKVYIEPLTVDSISRIIRQEYPDAILPTLGGQVGLNMALALAKTGILDELNIELLGTKL
KSIEQAEDREQFKNLCKELGEPVPPSKTVNTVEAAVEFGDEIGYPIIVRPAFTMGGTGGG
ICHNRKELAEIAKNGLELSPVTECLIEKSIAGYKEIEFEVMRDHDDNAMIVCCMENFDPV
GIHTGDSIVFSPSQTLSDKEYQMLRDCSLKLIRALKIEGGCNVQLALDPNSFDYDVIEVN
PRVSRSSALASKATGYPIAKMAAKIAVGMTLDEIKNPVTGTTYAEFEPALDYVVCKIPRW
PFDKFQKADRTLGTQMKATGEVMAIGRTAEEAMQKAVRSLEIDEKDLYSEEAHRASDDKL
EQKLVKAQDDRLFYLAEAFRRGYSLEDVHELTKINFYFLDIVKHMIEMEKELKENKDEVD
ILRLAKKYGFSDPTIANLWGETADEVRDFRKAHGIIPVYKMVDTCAAEFESQTPYFYSTY
DAENESHRSGKKSVIVIGSGPIRIGQGVEFDYATVHCVKALQKMGYEAIVINSNPETVST
DFSVSDKLYFEPLTLEDVLNVCDLEEPEGVIVQFGGQTSINLAAGLEAHGVKILGTTVKD
VNRAEDRKLFDDIIKELKLNQPQGLTATTHEGVIEAAEKLGYPVLVRPSYVLGGKAMEIV
YNKKELEEYLQDHVDIAADHPILVDDYLDGRECDVDAISDGYDVLLPGIMEHIEHAGVHS
GDSMAVYPPQTFTDEIKEKITEVTKKLALTLNCVGIMNIQFIVRDGEVYVIEVNPRASRT
VPFLSKITGIEMAQVATRVIMGESLKEQGYGDGLASEPDMISVKAPVFSFSKLADVDSYL
GPEMKSTGEVMGSDHTFAKALYKAFAGAKMQLPENGNVLLTIEDRDKDKILPIAKRFARI
GYRIFATKGTADFLKKNDLHVDLVTKVHEDEQADDNILNELRNNKIDLVINTMGHDIEKN
SDGFIIRQMAIQQNVPLLTALDTADALLTALENRSFATDALQ
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagagaaaagatattcataagattatggtgattggttctggtccaattattatt
ggtcaggctgcggaattcgactattctggtacccaggcttgtcttgctcttcgagaagaa
ggttatcaagtggtgttagttaactctaacccagctacgatcatgacggatacaactatt
gcagataaggtttatattgaacctttaactgttgattcaatttcaagaattattcgtcaa
gaatatccagacgctatcttaccaaccttgggcggtcaagtaggtttaaatatggcttta
gccttggctaagactggcattttggatgaacttaacatcgaattattaggaactaagctt
aagtcaattgagcaagccgaagatcgtgaacaatttaagaatttatgtaaagaattaggt
gaaccagttccaccatctaagactgtgaatacagttgaagctgccgtagaatttggggat
gaaattggttatccaatcatcgtacgtccggccttcacgatgggtggtaccggtggtggt
atctgtcataaccgcaaagaactagctgaaattgctaaaaatggtttggaactttcacca
gtaactgaatgtttgattgaaaaatcaattgccggttataaagaaattgagtttgaagta
atgcgcgatcatgatgataatgcaatgatcgtttgttgtatggaaaactttgacccggtt
ggtattcatactggtgattctatcgtcttttcaccaagtcaaactttgtcagataaagaa
tatcaaatgttgcgggattgttcgttgaaattaatcagagcattgaagattgaaggggga
tgcaatgtgcaacttgcccttgatcctaacagctttgattatgacgtaattgaagttaac
ccaagagtatccagatctagtgctttggcttctaaggcaacaggttatccgattgctaag
atggctgcaaagattgcggtggggatgacacttgatgaaattaagaatccagtaactgga
actacctatgcagagtttgaaccagcattagattatgtcgtctgcaagattcctcgctgg
ccatttgataaattccaaaaagccgatcgaactttgggtacacaaatgaaggctactggt
gaagtaatggccattgggcgtacagctgaagaagcaatgcaaaaggcggtaagatcactt
gaaattgatgaaaaggatctttattctgaagaagctcatcgagcaagcgatgataagtta
gaacaaaaattggttaaagcccaagacgaccgtttattctatttggcagaagcatttaga
cgtggctattcattagaagatgtgcacgaattaactaagattaatttttacttcttagat
atcgttaagcacatgattgaaatggaaaaagagctcaaagaaaataaagatgaagtagat
attttgcgcttagctaagaaatatgggttcagtgatccaactattgccaacttatggggt
gaaactgcagatgaagtaagagacttcagaaaagcacatgggattatcccggtttataag
atggtcgatacctgtgcagctgaatttgaatcacaaacgccatacttctactcaacttac
gatgcagaaaatgaatcacatcgatcaggtaaaaagtcggttattgttattggctctggt
ccaattagaataggtcaaggggtagagtttgactatgcaactgtacactgcgtcaaagct
ttgcaaaaaatgggttatgaagcaatcgtaattaactctaatccagaaactgtttcaact
gacttttcagtatctgataagctttacttcgaaccattaacgcttgaagatgtcctaaat
gtctgcgatttggaagagccggagggtgtgattgtacaattcggtggtcaaacttcaatt
aacttggctgctggtcttgaagcacacggtgttaagatcttgggtaccacagttaaggat
gttaaccgtgcagaagatcgtaagttgttcgatgacattattaaggaattgaagcttaac
caacctcaagggttaaccgcaactacacatgaaggagttattgaagctgcggaaaaactg
ggttatccagtcttggttcgtccaagttatgtcttaggcggcaaggcaatggagatcgtc
tataataagaaggaacttgaagaatacttgcaggatcacgttgatattgctgcagatcac
ccaatcttagttgatgattacttggatggccgtgaatgtgatgttgatgcaattagtgac
gggtacgatgttctcttgccaggaattatggagcacattgaacatgctggtgttcactca
ggtgactcaatggcagtttatccaccacaaactttcactgatgaaattaaagaaaagatt
actgaagtgactaagaagttagccttaactttaaattgtgtgggaattatgaacattcaa
tttattgttagagacggtgaagtctatgtcatcgaagtaaacccacgtgcaagtagaact
gtaccgttcttaagtaagattaccggaattgaaatggcacaggtagctacaagagtaatt
atgggtgaaagcttgaaggagcaaggttatggtgatggattggcatcagaaccagacatg
atttcggttaaggcaccggtcttcagtttcagtaaattagctgatgttgactcatactta
ggaccagaaatgaagtcaactggtgaagtaatgggcagtgaccatacttttgccaaggca
ttatacaaggcctttgctggagctaagatgcaactacctgaaaatggtaatgtactactt
acaattgaagatagagataaggataaaattttgccaattgctaaacgttttgccagaatt
ggttatcgtatctttgcaacaaagggtacagctgacttcttaaaaaagaacgacttacat
gtagatctagtaactaaggtccatgaagatgaacaagctgatgataacatcttgaatgaa
ttgagaaacaataagattgacttggttattaatacaatgggtcatgatattgaaaagaat
tctgatggctttattattagacagatggctattcagcaaaatgtaccgttattaacggca
ttagatactgcagatgcgctattgacggcacttgagaatagatcttttgcaacagatgca
ttgcaataa
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