Lactobacillus acidophilus NCFM: LBA1543
Help
Entry
LBA1543 CDS
T00231
Symbol
thrS
Name
(GenBank) theronyl-tRNA synthetase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
lac
Lactobacillus acidophilus NCFM
Pathway
lac00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lac00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LBA1543 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lac01007
]
LBA1543 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lac03016
]
LBA1543 (thrS)
Enzymes [BR:
lac01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
LBA1543 (thrS)
Amino acid related enzymes [BR:
lac01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LBA1543 (thrS)
Transfer RNA biogenesis [BR:
lac03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LBA1543 (thrS)
Prokaryotic type
LBA1543 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
tRNA-synt_His
Motif
Other DBs
NCBI-ProteinID:
AAV43361
UniProt:
Q5FIW3
LinkDB
All DBs
Position
complement(1531790..1533724)
Genome browser
AA seq
644 aa
AA seq
DB search
MSFSVTLPDGSKKEFDKAVSVKEVASSIATSLGKAAVGAKVNGQVKPLDYEIDSDVEIAI
ITDKDEEGLDILRATAAFAFEAVAKKKYPELRLGQHVADEGGFYVDTDKKDQIKVTELPE
LEKAMEKLIKSGQPIEHVVMDKSELEEMFKDDPFKSDLLKKIDSDKVDAYKLGDFVDFGF
DALLPNTGKIKHFKLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKEDLKRRAEIKERD
HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYKHVYTPVLMNLD
AYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGM
MHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMDVYRDFDITDYYFRL
SYRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKTALGN
DETMSTIQLDFMLPERFGLTYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIYKGAFPTW
LAPVQAEIIPVNNEAHGEYAEKVRQELAKRGFRVEVDDRNEKMGYKIRESQTQKVPYTLV
LGDEEMKNGSVNVRRYGTDEEISKSLDDFINEIDADVKSYSREN
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttcagttactttgccagatggctcaaagaaagaattcgacaaggctgtttca
gttaaagaagtagcttcatcaatcgctacttctcttggaaaggctgctgttggtgctaag
gtaaatggtcaagttaagccacttgattacgaaattgatagtgatgttgaaattgctatc
attactgataaggatgaagaaggattagatatcttaagagcaactgcagcttttgcattt
gaagctgttgctaagaagaagtacccagaacttcgtttaggtcaacacgtagctgatgaa
ggtggcttctatgttgatactgacaagaaggaccaaattaaggttactgaattgccagaa
cttgaaaaggcaatggaaaagcttattaagagtggtcaacctattgaacatgttgtaatg
gacaagtcagaacttgaagaaatgttcaaggatgatccattcaagagcgatcttttaaag
aagattgactctgacaaggttgatgcttacaaattaggtgactttgtggactttggcttt
gatgcattattaccaaacactggtaaaattaagcactttaagcttttatcagtagctggt
gcttactggcttggtaagtcatcaaaccctatgcttcaaagaatttttggtactgcattc
ttcaaggaagctgctttaaaggaagacttgaagcgtcgtgctgaaattaaggaacgtgac
caccgtactatcggtcgtgaccttgatctcttcttcgtagatcctaaggttggtgcaggt
cttccttactggatgccaaagggtgctactattcgtcgtgttgttgaacgttacatcatc
gatcgtgaagtagctgacggttacaagcacgtttacactccagtacttatgaaccttgat
gcttacaagacgtcaggtcactgggcacactatcgtgatgacatgttcccaccaatggac
atgggtgatggcgaaatgcttgaacttcgtccaatgaactgcccatcacatattcaaatt
tacaagcaccacattcgttcataccgtgatttaccacttcgtgttgctgaacttggtatg
atgcacagatacgaaaaatcaggtgctttatctggtcttcaacgtgtacgtgaaatgacc
ttgaacgatggtcacacatttgtagaacttgatcaagttcaaagcgaatttgctaagatc
ttgaagttgatcatggacgtatacagagacttcgatattactgattactacttcagactt
tcataccgtgatccaaagaacactgacaagtactttgcaaatgatgaaatgtgggaaaga
agtcaaaagatgcttaagggtgctatggatgaccttggccttgactatgttgaagctgaa
ggtgaagcagcattctatggtcctaagcttgatattcaaactaagactgctttgggtaac
gacgaaactatgtcaactatccaacttgatttcatgctcccagaaagatttggcttaact
tacgttggtaaagatggtgaagaacaccgtccagttatggttcaccgtggtattgttggt
actatggaaagattcattgcttaccttactgaaatctacaaaggtgcattcccaacttgg
cttgctccagttcaagctgaaatcatcccagttaacaatgaagctcatggcgaatatgca
gaaaaggttcgtcaagaacttgctaagcgcggcttcagagtagaagttgatgatagaaac
gaaaagatgggttacaagattcgtgaatcacaaactcaaaaagtaccttacactttagta
ttaggtgacgaagaaatgaagaacggtagcgttaacgtacgtcgttacggtactgatgaa
gaaatttctaagagtcttgatgacttcattaatgaaattgatgctgacgttaagtcatac
tcaagagaaaactag
DBGET
integrated database retrieval system
