Lactobacillus acidophilus NCFM: LBA1976
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Entry
LBA1976 CDS
T00231
Symbol
thdF
Name
(GenBank) thiophene and furan oxidation protein
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lac
Lactobacillus acidophilus NCFM
Brite
KEGG Orthology (KO) [BR:
lac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lac03016
]
LBA1976 (thdF)
Transfer RNA biogenesis [BR:
lac03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LBA1976 (thdF)
Prokaryotic type
Methyltransferases
LBA1976 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
GTP_EFTU
Ras
MMR_HSR1_Xtn
Roc
Tyr-DNA_phospho
AAA_22
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AAV43769
UniProt:
Q5FHQ5
LinkDB
All DBs
Position
complement(1990180..1991565)
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AA seq
461 aa
AA seq
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MAQVLTEFDTIAAISTPIGEGGISIVRMSGEDAIKIANEVFKGADLAQVPTHTIHYGHII
DPDTGKTIDESMVTVLRAPKTFTCEDIVEINCHGGIVVTNHILQLLLKHGARMADPGEFT
KRAFVNGRIDLTQAESVMDIVRAKTDKARQVAVSQLEGGLLHKIRTMRQEILDTLANVEV
NIDYPEYDADTVTANQMADTAKSVIEKIDRLLKTAQEGKILRNGLATAIVGQPNVGKSSL
LNYLTQSDKAIVTDVAGTTRDTLEEYVSVKGVPLELIDTAGIHHTDDKVEKIGVERSKKA
LERADLVLLLIDASKELTAEDKSLINETDSKKRIIILNKSDLGQKITVEQMKKLTGSEVI
STSILKEDNMDELEELINKLFFAGIENSNDQVMVTNQRQTSLLHKAKSELEDVIQAVDDG
IPVDIAQIDFTGAWDTLGEITGESAPDELITQLFSQFCLGK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggttttaacagaatttgatacaattgcagcaatttcgactcctattggtgag
ggtggaatctccattgttcgaatgtccggtgaagacgcgattaaaattgctaatgaagtt
tttaagggtgcggatttggcccaagtgccaacacatacgattcattacggtcatattatt
gatcctgatactggaaaaactattgatgaatcaatggtaacagtattgcgcgcgcctaag
acttttacctgtgaagatattgtggaaatcaactgtcatggtggtattgtggttactaac
catattttgcagcttcttttgaaacatggtgcacgaatggccgatccaggcgaatttact
aaaagagcatttgttaatggaagaattgacttaactcaagcagaaagtgtaatggacatt
gttcgcgctaagactgataaagcacgtcaagttgcagtaagccagcttgaaggtggactt
ttgcacaagatacgcacaatgcgtcaagaaatcttagatacgcttgctaatgttgaagtt
aacattgattatccagaatatgatgcagatacagttactgccaatcaaatggctgataca
gctaaatcagtaattgaaaaaatagatcgcttattaaagacagctcaagagggaaaaatt
ttacgcaatggcttagcaacagctattgtaggtcagcctaatgtaggaaaatcatcatta
ttaaactatttgacacaaagtgataaagcaatcgtaactgatgtggcaggtacaactcga
gatacactagaagaatatgtatctgtaaaaggagtaccactggaattaattgatacggca
ggtattcaccataccgatgataaagttgaaaagattggtgtggaaagatctaagaaagct
ctagaaagagctgatcttgttctcttgttgatagatgcaagtaaagaattaacagctgag
gataagtcactgattaatgaaaccgattccaaaaaacgaattattattttgaacaagtcc
gacttaggtcaaaaaataactgttgaacaaatgaaaaaattaacaggtagcgaagttatt
tccacttcaattttgaaagaagataatatggatgaacttgaagaattaattaataagtta
ttctttgcagggattgaaaattctaatgatcaagtaatggttactaatcaacgacaaact
tcacttttgcacaaggcaaaaagtgaattggaagatgttattcaagctgtggatgatgga
atacctgtggatatcgctcagattgatttcactggcgcgtgggatacattaggagaaatt
acgggtgaaagtgcaccggatgagttaataacacaattatttagtcaattctgtttagga
aagtag
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