Ligilactobacillus acidipiscis: LAC1533_0866
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Entry
LAC1533_0866 CDS
T05349
Name
(GenBank) Exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
laca
Ligilactobacillus acidipiscis
Pathway
laca03030
DNA replication
laca03430
Mismatch repair
laca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAC1533_0866
03430 Mismatch repair
LAC1533_0866
03440 Homologous recombination
LAC1533_0866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
laca03032
]
LAC1533_0866
03400 DNA repair and recombination proteins [BR:
laca03400
]
LAC1533_0866
Enzymes [BR:
laca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAC1533_0866
DNA replication proteins [BR:
laca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LAC1533_0866
DNA repair and recombination proteins [BR:
laca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LAC1533_0866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
SFV40286
UniProt:
A0A0R2K0F9
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All DBs
Position
I:complement(959856..960389)
Genome browser
AA seq
177 aa
AA seq
DB search
MDFIALDFETASPKRHSACSLALTVVRNDQVIDEMYSLIKPATKFSPNNIRIHGITPQDV
ANSPTFPQLWPHISSFFGPQKLIVAHNASFDVSVLRKTLGFYKLPVPNFMVLDTLKTSRQ
LLNDLPNYQLNTVCDFLSILLKHHHNALADSRACAQILISEAQQYGTEVLKPLIRAY
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atggattttatagcactcgattttgaaacagcaagccctaaacgccatagtgcttgttca
cttgcactcacggtagtgcgtaatgaccaagtgatcgatgaaatgtattccttgataaaa
ccggcaaccaaattttcacctaacaatatccggatacacgggatcacaccgcaagatgtc
gcgaattcaccgacttttccgcaactttggccacatatttcatctttttttggaccacag
aaattaatagtcgctcataatgcatctttcgatgttagcgtgttacggaaaacattgggt
ttttataagttgcccgttcctaatttcatggttttagatactttaaaaacaagccggcaa
ctattaaatgatctgccaaattaccaactaaacactgtgtgtgattttttatcaatttta
ttaaaacaccatcataatgctttggcggacagccgggcttgtgcacaaattttaatttcc
gaagcacaacagtacggaacagaggttttaaaaccgttgattagagcttactaa
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