Ligilactobacillus acidipiscis: LAC1533_0970
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Entry
LAC1533_0970 CDS
T05349
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
laca
Ligilactobacillus acidipiscis
Pathway
laca03030
DNA replication
laca03410
Base excision repair
laca03420
Nucleotide excision repair
laca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAC1533_0970
03410 Base excision repair
LAC1533_0970
03420 Nucleotide excision repair
LAC1533_0970
03440 Homologous recombination
LAC1533_0970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
laca03032
]
LAC1533_0970
03400 DNA repair and recombination proteins [BR:
laca03400
]
LAC1533_0970
Enzymes [BR:
laca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAC1533_0970
DNA replication proteins [BR:
laca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LAC1533_0970
DNA repair and recombination proteins [BR:
laca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LAC1533_0970
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAC1533_0970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
NYN_YacP
XPG_I
HHH_5
Motif
Other DBs
NCBI-ProteinID:
SFV40390
UniProt:
A0A1K1KNB7
LinkDB
All DBs
Position
I:1078000..1080666
Genome browser
AA seq
888 aa
AA seq
DB search
MTKQEDTLLLVDGNSVAFRAFFALQNVGSFTNHDGLHTNAIYVFKKILDNILKKYSPTNV
LVAFDAGKTTFRTKKYSDYKAGRAKTPGELSEQFPYLKKMLAAYGIKDYELADYEADDII
GTLSRQGQAEGYRVVVVTGDRDLTQLTTDKTTVAVTQKGFSEVEEYTPDHVKEKYGLEPK
QIIDMKGLAGDNSDNYPGVTKVGEKTAIKLLKQYTSVEGIYEHIDEMKQSKMKEHLIEDK
ETALLCKDLATIKTDAPLTIKLIDTKRQEMNETDLHSLYEELDFKSFLKDLTGEDPDEQK
AFDKLAVTMLTQKNLDKVPAKIKEPVVFYLEMDGKNYHNAPFVGFVFKIADQYYGARDVE
LLKQAPLKQILTDPAIKLDVFDCKRTFVGLNRLGITMTNVDFDLLLVSYLLNNTENSDDL
GELASLHGFDQVKTDEQFYGKGAKREIPAEDEQLFAHLSHKVFAIATLKEPLFTELKNNQ
QQNLYDEMELPLAQVLAKMEIAGISVDTERLEQMKSEFKERLSELKQDIYNEAGEEFNIN
SPKQLGHILFEKLELPVIKKTKTGYSTAVSVLEKLRGMSPIVDNILTYRQISKLQSTYIE
GLLKVVFKEDQKVHTRYTQTLTATGRLSSVDPNLQNIPVRLEEGRKIRQAFLPSRAGWQI
FSADYSQIELRVLAHIAGDEHMQEAFKEDRDIHANTAMQIFGLDSEDEVTPNIRRQAKAV
NFGIVYGISDYGLSQNIGITRKQAKQFIDTYFEKFPGVKKYMDEIVEHAREEGYVETIFH
RRRYLPDIKNKNYNIRSFAERTAMNSPIQGSAADIIKVAMINMDKKLAEKKMQAKMLLQV
HDELIFEVPDEELTDFEELVKSVMDSAVDLNVPLKVECAHGKTWFSAK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacaagaagatacacttttattagttgatggtaatagcgtggcttttcgtgct
ttttttgctttacaaaatgtcggcagctttacaaaccacgatggtctacatactaatgct
atttatgtttttaaaaagatccttgataatattttgaaaaagtattctcctactaacgtt
ttggtggctttcgatgctggcaaaacaactttcagaacaaaaaaatattctgattataaa
gcaggtcgagctaaaacacctggagaactcagtgaacaatttccgtatttgaagaaaatg
ttggcagcatatggaatcaaagattatgaattggctgattacgaagctgatgatattatc
gggactttatcccgccaaggacaagcagaggggtatcgtgtcgtcgttgtcactggggac
cgtgacttgactcaattgacgactgataaaacgactgtcgctgtgacacaaaaaggcttt
agcgaggtcgaagaatatactcctgatcatgttaaggaaaaatatggtttagaacctaag
caaattatcgatatgaaaggcttagctggagataattcggataattatccaggtgtgact
aaagtcggtgaaaaaacggctattaaactattgaagcaatatactagcgttgaaggtatc
tacgaacatattgacgaaatgaagcagtctaaaatgaaggaacatctgatcgaggacaaa
gaaactgcactgctatgtaaagacttagccacgatcaaaacagatgcgcctttgacgatc
aaattaattgatacaaagcgacaagaaatgaatgaaacagacttgcactccttgtatgaa
gaacttgattttaagagctttttaaaggacttgactggcgaggatccggatgaacaaaag
gcattcgataaacttgcagtgacaatgttaactcagaaaaacttggataaagtccctgca
aaaattaaagaaccagttgtcttttatttggaaatggacggcaaaaattatcataatgct
ccctttgttggctttgttttcaagatcgcggatcaatattatggtgctagagatgttgaa
ttattaaaacaagcgccactgaagcaaatattgaccgatccggctattaagcttgatgtt
tttgattgtaagagaacttttgttggtttgaatcgtctgggaattacaatgaccaatgtc
gattttgatttgctgttagtgtcttatttattgaataacactgaaaatagtgatgatctt
ggtgaattggctagtcttcacggatttgatcaagtcaaaaccgatgaacaattttatggt
aagggtgctaaacgggagattccagctgaagatgaacaattatttgctcatttgagtcat
aaggtctttgcgatagcaactttaaaagaaccacttttcactgaattgaagaataaccag
caacaaaatctatatgatgaaatggaattaccgttggcacaagttttggcaaaaatggaa
attgctggtatttctgtagatactgaacgcttggagcaaatgaaaagtgaatttaaagaa
cgtttgtctgaattaaaacaggatatctataatgaagctggtgaagaatttaatattaat
tcaccaaagcaattggggcacatactatttgaaaaattagaattgccagtgatcaaaaaa
actaaaactggttattctactgcagtcagtgtgttagaaaaattgcgtggaatgtcaccg
atcgttgataatattttgacatatcggcagatttctaaattgcaatcaacgtatatcgaa
ggtttgctaaaggtcgttttcaaggaagatcaaaaagttcatactcgctatacgcagact
ttgacagcaaccggacgtttgtcttcagttgaccctaatttgcaaaatattccagtccgt
ttggaagaaggacgtaagatcagacaggcttttttaccgagtcgtgcgggttggcagatt
ttttctgctgattactcgcagatcgagcttcgtgttttagcacatattgctggtgatgag
catatgcaagaagcctttaaagaagatcgcgatattcacgctaataccgccatgcagatc
tttggtcttgacagcgaagacgaagttaccccaaatattcgtcgccaggctaaagccgtc
aatttcggcatagtatatgggatcagtgactatggtttgtcgcaaaacatcgggatcaca
cgtaaacaggccaaacaatttattgacacttattttgaaaagtttcctggggtcaaaaaa
tacatggatgaaatcgttgagcacgcgcgtgaagaaggttacgtagagacgattttccat
cgacgtcgttatttgccagacatcaaaaataaaaattataatattcgttcctttgctgaa
cggacggcgatgaatagtccgatccaaggcagtgctgcggatatcatcaaagtcgcgatg
atcaacatggataaaaagttagctgaaaagaagatgcaggctaaaatgttactgcaagtc
catgatgagttgatttttgaagtcccagacgaagaattgaccgatttcgaggaactggtc
aaaagtgttatggattcagctgttgatttaaatgttccactcaaagtggaatgtgcccat
ggcaaaacatggtttagtgcaaaataa
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