Ligilactobacillus acidipiscis: LAC1533_1004
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Entry
LAC1533_1004 CDS
T05349
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
laca
Ligilactobacillus acidipiscis
Brite
KEGG Orthology (KO) [BR:
laca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laca03400
]
LAC1533_1004
Enzymes [BR:
laca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LAC1533_1004
DNA repair and recombination proteins [BR:
laca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LAC1533_1004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
RecC_C
DYN_lid
Motif
Other DBs
NCBI-ProteinID:
SFV40424
UniProt:
A0A0R2KGI8
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All DBs
Position
I:1111001..1114756
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AA seq
1251 aa
AA seq
DB search
MSLGFIYGKAGTDRQKLVLQQLEEWQSSASVSEIFYIVPDHIKFESEVNVLDYLRHQKGE
MEKMFASANVQTFSFSRLMWYFLKEQPALTKTRLTPTGLSMIVTHILHELDEKELYVFTR
ERNSPGFSKKLAEQIVELKLGGFLPEDLEQFAKNLQTKDKGEQVDLGQRLHDLSLVYTKF
EKYIAGQYLDTAESLDELINYLQTVDLSRSCFVIDGFTSFNAKEKEVISVLMQKAAEVRV
SLILNHKYVDSKPETSDLFYQTGKIYYELTQQAKASHVARMVDKRAADSRVSADLTSLED
FWIDSQTFSPPKKYYLEDAQSLSLTETSDRVREIRYVAAKIRNLVFTGNYKYHDFLILTP
QQDKYQNLLENVMDEYDIPIFTDLNKTMLNHPLVEFVLALFSVQQQNYSYRSVMRLLKTE
IFVPKIDEPNWTLGTFRNTLDLLENCILQNGYFYESSWKDPEDWVVETCGMKPNESPEEH
QKRQANLPNNRFVNKVRREVYRQLSSFFKKVNKVKTGREFAVELINFLEKIGVPQTLQGW
QVSAAKDLENDPTRLSGSVSDVSRHEEVWNTLCSLLDEYVTALGAEPLDLEEFIALIQNG
FDNAKYSQVPSTLDQVIFSESGVVQMQNRRVLFFVGVTDAVMPRTFENNALLSDIDRDEI
EQLTGEGSAEKYLTETAEIRMAEEPFANYLSFMAVNSRIFFTYPLSDNDGQPLRLSPYIE
RIKNAFSLQVQHPEKQLDPTADNIIDLIGTKATTLGELLSVSRDAFHNGKDLHATWRGLY
RYLSATYNQRTTQLFKSLGFSNDVLPGQSEKADGHKYLDPEIVHGLYGDQINTSISKLET
FFADPYQYFLQYGLKLRPRQEFLLQPADTGEYFHFIMEYFFRNILKQGKTLAEISSNEFD
ELMAKTLQQVSEEFCGKIFSSTARYRYTQRQLTHTADQVIHAIARQRKKRKIYTVKTETS
FGDQTGLPALVFADPTSKDNASKMNLRGRIDRIDLVEGQDGKLYYNVIDYKSGDPERKMD
HFLLRAFNGLSLQLLTYLRALQQAADNGDLTNMLNGSSNLARQLVHNKKDPELGSASYLH
LFDPIIKKESKDHARELDKNYMYKGIFRRGADASNEENGFLLALDQDLESAAQTGGSASS
DNYPVKYVKSKKDFKTSTAKSLLLTINQIRELLLYNDLKIEEARKNIFAGVIDLAPYRLD
NSTGLDYSDYQEIMMFDPLLDRNNYRKITKMSDEEIWSEIQKMIKERGTTD
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttagggtttatttatggtaaggcgggaactgatcggcagaaacttgttttacaa
caactggaagagtggcaaagttctgccagtgtttcagaaatattttatatcgtacctgac
cacattaaatttgaatcagaagttaatgttttagattatttacgacaccaaaaaggagag
atggaaaaaatgtttgcatctgccaacgtgcagactttttcatttagtcgtttgatgtgg
tattttttgaaagaacaaccagctttaaccaaaacacgtttgactccaacaggactttct
atgatcgtgacccatattttgcatgaacttgatgaaaaagaactttacgtttttactcgt
gagagaaatagtcctgggtttagtaaaaaattagccgaacaaatagtagagcttaaatta
ggtggttttttaccagaagatttagaacaatttgctaaaaatttacagacaaaagataaa
ggagaacaagttgatcttggtcaaagattacatgatctttcactagtttatacgaagttt
gaaaaatatattgctggtcaatacttagatacggcagaaagcttggatgagttgatcaat
tatttgcaaacagttgatttaagtcggtcttgttttgtgatcgatggttttacaagtttt
aatgctaaagaaaaagaagttatttcagtgttgatgcaaaaggctgctgaagtcagagtt
agtttgatcttgaatcataaatatgttgatagtaaacctgaaacaagtgatttgttttat
caaaccggtaaaatctactatgagttaacacagcaggctaaagcgtcacatgtagcacga
atggtcgataaaagagcagcagattctcgggtatcagctgatttgaccagcctcgaagat
ttttggatagattcacaaacgttttctccgccaaaaaagtattacttagaagatgcccag
agtttgtctttgacagaaacatctgaccgtgtacgtgagattcgttatgtagccgcaaaa
attagaaatcttgtttttacgggtaattataagtatcacgattttctgattttaacgcca
cagcaggataaatatcagaatctgttggaaaatgtgatggatgagtatgacattccaatt
tttactgatttgaataaaacaatgcttaatcatcctttagttgaatttgtacttgctttg
tttagtgtgcaacaacaaaattattcctatcgttcagtaatgagattgttgaaaaccgag
atttttgtacccaagatcgacgaaccaaactggactctcggaacattcagaaacacatta
gatcttttagaaaattgtatattgcaaaatggctatttttatgaatcttcgtggaaagat
ccagaggattgggtcgtcgaaacttgtggtatgaaaccaaatgagtcaccagaagagcac
caaaagcgtcaagctaatttacctaacaatcgttttgtaaataaggtccgtcgggaagta
taccggcaattaagttcatttttcaaaaaggtcaacaaggttaagacaggacgagagttt
gctgttgaattgataaatttcttggaaaaaatcggtgtgccgcaaactttacagggttgg
caagttagtgccgctaaggatcttgaaaatgaccctactcgtttaagtggttcggtcagc
gatgtttctcggcatgaagaagtctggaacaccttatgttctttattagatgagtatgtg
acagctttgggcgcagaacctttggatctggaagaatttatcgctcttattcaaaacggt
tttgataatgctaaatatagtcaagttccctccactttagatcaggttatattttctgaa
agcggagtagttcaaatgcaaaataggcgggtgttattttttgttggagttactgatgct
gtcatgccgcggacatttgaaaataatgcgttgctttctgatatagatcgtgatgagata
gaacaattaactggcgagggatctgctgaaaaatatttgactgaaacagcggagattcga
atggcggaagaaccgtttgcgaattatttatcatttatggcggtcaactcgcggattttc
ttcacttatccgttgagtgataatgatggccagccattacgactttcaccttatattgag
cggatcaaaaatgctttttctttgcaggttcaacatcctgaaaaacagctagatccaaca
gccgataatattattgatttgattgggaccaaggctacgactttgggtgaactgttgtcg
gtaagtcgagatgcttttcataatggaaaagatcttcacgcaacttggcgaggtctttat
cgttatttatcagcgacttataaccaacgaacaacacagctttttaaaagtttaggtttt
tctaacgatgtgttgccaggccagtctgaaaaagctgatggtcataaatatttagatcct
gaaatagttcatggtttatatggcgaccagatcaatacttcgatctctaagttagaaact
ttttttgctgatccctaccagtactttttgcaatatgggttaaaattgcgcccacggcag
gagtttttacttcaaccggctgataccggagaatattttcactttattatggagtatttt
ttccggaatatcctcaagcagggcaaaactttggcggaaatcagcagtaacgaattcgat
gaattaatggcaaagacattgcaacaagtttcagaagaattttgcggaaagattttttct
tccacagcaaggtatcgatacactcagcgccaattgactcatacggctgaccaagtgatt
cacgcgatcgctagacaacgaaagaaaagaaaaatctatacagtcaaaactgaaacgtca
tttggagatcaaacaggacttcctgcgctggtttttgcagatccaacaagtaaggacaat
gcttcaaaaatgaatttacgtggacggatagatcggatagatctcgttgaaggtcaggac
ggaaaactttattataacgtgatagattacaagtctggtgatccggaacgaaaaatggat
cattttttactacgtgcttttaatggactctctttacagttattgacttatctgcgtgct
ttacagcaggcggctgataatggtgatttgaccaatatgttgaatggttcttcgaattta
gcacgacaattagtccataataagaaagaccccgagttgggtagtgcttcatatttgcat
ctatttgatccaataattaaaaaagaaagcaaagatcatgcccgtgaattagataaaaat
tatatgtataaagggatattccgtcgcggagcagatgcttctaatgaagaaaacggcttt
cttttagctttggaccaagatttggaatcagctgcgcaaaccggtggctcagcgtcatct
gataactatcctgttaaatatgttaagagtaagaaggattttaagacaagtactgccaaa
agcctgttattgacgatcaaccaaatcagagaattgctgttatacaatgatttgaaaata
gaagaggcgcgcaaaaatatttttgccggagtgatcgacttagccccttatcgtttagat
aatagtactggacttgactattcggattatcaggagatcatgatgtttgatccgctgctc
gaccgaaataactaccgtaagataactaaaatgtccgatgaagaaatctggagtgaaata
caaaaaatgatcaaagaaagggggactacagattga
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