Ligilactobacillus acidipiscis: LAC1533_1061
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Entry
LAC1533_1061 CDS
T05349
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
laca
Ligilactobacillus acidipiscis
Brite
KEGG Orthology (KO) [BR:
laca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
laca03016
]
LAC1533_1061
Enzymes [BR:
laca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LAC1533_1061
Transfer RNA biogenesis [BR:
laca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LAC1533_1061
Prokaryotic type
LAC1533_1061
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-ProteinID:
SFV40481
UniProt:
A0A1K1KNP4
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All DBs
Position
I:1179328..1180248
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AA seq
306 aa
AA seq
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MEGILPLYKERGMTSNDAVFKCRKIFKTGKVGHSGTLDPNVDGVLPICIGKATKVVNYLM
DSGKIYQGEITLGFATETEDLEGKIITKEEIEKRISADQIDEKMRELTGTQIQIPPMYSA
IKVNGRRLYDYARHNEPVKRPERQVTVDYFKQTSPTVYDQEKKQQKIFFEVGCQKGTYVR
TLAVDLGKKLGVPAVMSDLTRLKSGGFSIEESISLKKLSEMDEQQLEQILKPVSHALKKY
PQYELSVDEWKIIQNGGFLSPESVQNQLKGELQNKLVLFYEGRARCVYFYNRPKKRYQPE
QMIDLV
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtattttgcctttatataaagaaagaggaatgacaagtaatgacgcagttttc
aagtgcaggaaaatcttcaaaacaggtaaagttggtcattcaggaacactagatcctaat
gttgatggcgttttaccaatatgtattggaaaagcaaccaaggtcgttaactatttaatg
gattctggtaaaatatatcaaggagagatcacattaggatttgcgaccgaaactgaagat
cttgaaggaaaaattattactaaagaagaaattgaaaaacgaatatctgccgaccaaata
gacgaaaagatgagagagttgacgggtacgcagattcagatcccaccgatgtactcagct
attaaagttaacggccgccgtctatacgattacgctcggcacaatgaaccggtcaaacgg
cctgagcgtcaagtgaccgtagactatttcaaacaaaccagtccaacagtttacgatcag
gaaaaaaaacaacaaaaaatcttttttgaagttggttgtcaaaaggggacatatgtacgg
acactagcggttgatttagggaaaaaattgggtgtacctgcagtgatgtctgacttaact
agactaaaaagtggtggtttttcaattgaggaatcgattagcttaaaaaagttaagtgaa
atggatgaacaacagctggaacaaattttaaagcccgtcagtcacgccttgaaaaaatat
ccgcagtacgaattatctgttgatgaatggaagatcattcaaaatggcggctttttaagt
cccgaaagtgtgcaaaaccaacttaaaggtgaactgcaaaacaaacttgttttgttttat
gaggggcgtgcacggtgtgtttatttttacaacaggcctaaaaaaagatatcaacctgag
caaatgatagatttagtctga
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