Ligilactobacillus acidipiscis: LAC1533_1176
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Entry
LAC1533_1176 CDS
T05349
Name
(GenBank) DNA recombination and repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
laca
Ligilactobacillus acidipiscis
Pathway
laca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LAC1533_1176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laca03400
]
LAC1533_1176
DNA repair and recombination proteins [BR:
laca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LAC1533_1176
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LAC1533_1176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
AmoC
DUF7602
Motif
Other DBs
NCBI-ProteinID:
SFV40596
UniProt:
A0A0R2KHR6
LinkDB
All DBs
Position
I:1287055..1287849
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AA seq
264 aa
AA seq
DB search
MKGSVKLASHQVVDFHGIVISRNDYKERDMLVKILTDKFGIKTFFVRGARKKGFKLASAI
LPFSHGTYFGNVNDHGLSFINGTRELEQYQQIYSDIELNAYASYILGLVGAAFGNDEPLP
GVWFDNIATAINLIDQRFDAAIVANIIEIQLLEQFGVKPFLESCVICGNSSGPFDFSETY
GGLLCQQHWYLDLHRLHLDQRTIYYLRLFSVIDLKQLHSIKVKDVTKQHLRHTIDTLYND
QVGVYVKAKKFIDQMGSWDQILKK
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgaagggaagtgttaagttggcatcacatcaagtagtggactttcatgggatcgtcatt
tcacgtaatgattataaagaacgagatatgttagttaaaatcttgacagataaatttggg
atcaaaactttttttgtcagaggtgcccgaaagaaaggattcaaattagcgtcagcgatc
ctacctttttctcatggaacatattttgggaatgttaacgaccacggactttcatttatt
aatggaactagggagttggaacaataccagcagatatactctgacatcgaactgaatgca
tatgcttcgtatattctaggactcgttggggctgcctttggaaacgatgaacctttgccc
ggagtttggttcgataatattgctactgcaattaatttgatcgatcaaagatttgatgca
gctattgtcgccaatatcatagagatccaacttttagagcagtttggagtgaaaccattc
ttggaaagctgtgtgatctgtggtaattcttccggtccgtttgatttttccgagacatat
ggcggacttttatgccaacagcactggtatctagatcttcatcgcttgcatttagaccaa
cggacaatttattatttgagacttttttctgttatcgatcttaaacaactgcattcaatc
aaggttaaggatgtgactaaacagcacttacgccacactatcgatactttgtataatgac
caagttggggtctatgttaaagctaaaaagtttattgatcaaatgggaagttgggatcaa
attttaaaaaaatag
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