Ligilactobacillus acidipiscis: LAC1533_1191
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Entry
LAC1533_1191 CDS
T05349
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
laca
Ligilactobacillus acidipiscis
Pathway
laca03030
DNA replication
laca03430
Mismatch repair
laca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAC1533_1191
03430 Mismatch repair
LAC1533_1191
03440 Homologous recombination
LAC1533_1191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
laca03032
]
LAC1533_1191
03400 DNA repair and recombination proteins [BR:
laca03400
]
LAC1533_1191
Enzymes [BR:
laca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAC1533_1191
DNA replication proteins [BR:
laca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LAC1533_1191
DNA repair and recombination proteins [BR:
laca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LAC1533_1191
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
SFV40611
LinkDB
All DBs
Position
I:1308819..1312157
Genome browser
AA seq
1112 aa
AA seq
DB search
MFSPLQVISCYSLLQSPLKISDLVKKASEMGYQALAITDINVMYGVLDFYKACRKYHIKP
LLGLTLQLNDTRQKQTANDVILLAKNNQGYHNLMKLSSLKMTKDPDDPNGDRLLLTEIAP
LLHELFVITPTKNSLVLEALHSHNFTGAKTELTKIKEICEPNSLFLGVSMHMEDQLVIDL
RALAKELNLNIVAASPLKYLRPEQNFEVSVLNSIRLGKKMTSSELTHQQDGLHFLKSPQE
FLQEYRKSGLEDAFQNTTQIVDQVDIQIEFPPTRLPRFKTPKGYTSAQYLQELCQAGLKK
RAQENQIGNLKPYQKRLDHELAVIERMGFDDYFLVVWDVTHFAHEHQIMIGPGRGSAAGS
LVAYTLMITDVDPIQYNLLFERFLNEERVQMPDIDLDIPDLKRDQVIKYVHKKYGHEQMA
QIITFGTLAAKQALRDVGRVMGETTYEMDQWSKAIPSVLHITLAEAYQKSQRLQNLVADS
QKNELIYRTATHLEGLPRHYSLHAAGVILSEQKLSDLVPVQLGPDEMLVTQFAKDQVEEV
GLLKMDFLGLRNLTILENSLRFIAIGCQQKLDIHQIDLKDPPTLALFQKADTNGVFQFES
DGIRNVLRKLVPTSFEDIAAVNALYRPGPMNNIDEFIARKHGQRRVTYPDPSLKKILEPT
YGIMVYQEQVMQVASAMGAFSLGQADLLRRAMSKKKHDVISEMQQKFINGATSKGFDSQT
AEKVYDYISRFGDYGFNRSHAVAYSKMAFELAYVKCHYPAAFYAALLNSVIGSDKKIKTY
LTEAKSRQIKVHAPAINESEIYFILKNHAIYFGLGCIKTVRRNFVHAIIQERKAHGPYRT
FNNFLQRIPAEFLKQEGIEALIYSGAFDELEPSRAKLLDQLPKMLKNAELSGANVELFEM
LAPKAEETVPELSEEERLNKENYYLGAFLSGHPVEKFPNLMQTYHTAKVSEIRAGQSVTT
IVYVKKIKTIRTKKGEQMVFVTADDETGTIDLTVFPQQFRQYGSKLSEGVVVMVKGKVEE
RRGLQLLVSSLNLAQDVIKQRYFLRLPNGSSVQKKQELKRLLEVFHGKVPVIVYDEHSNR
KVLLSEELWLSTDDRAQQEVIKLLGESNVVLK
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtccgcttcaggtcattagttgttatagtttgctgcaaagtccacttaaaatt
tcagatttagtaaaaaaagcaagtgaaatgggttatcaagccctagctataactgacatt
aacgttatgtatggcgttttagatttttacaaagcctgtcgaaaatatcatattaaacca
ttgttgggcctaactttgcaattaaatgatacaagacaaaagcaaacggccaatgatgtg
atcttgttagccaaaaacaaccagggttaccataatttaatgaaactttcgagcctaaaa
atgacgaaagatcctgatgatccaaacggagatcgtcttttattgacagaaattgcaccg
ctcttacatgaactttttgtgatcacaccaactaagaacagtttagtgcttgaagcattg
catagtcataacttcactggagctaaaacggaactcactaagatcaaagaaatctgtgag
cctaacagtttatttttaggagtcagtatgcacatggaagatcagttagtgatcgatctt
cgtgccttggcaaaagaacttaacttgaacattgtggcagcttctcctctaaaatattta
cgaccagaacaaaattttgaagtttcagtcttgaactctattagactcggtaaaaaaatg
actagttctgaattaacacatcaacaggatggactgcattttttgaagtctccgcaagaa
tttctgcaggaatatcggaagtccggattagaagatgcctttcaaaatacaacgcagatc
gtggaccaagtcgacatccaaattgagtttccaccgactcgattgccgcgtttcaaaaca
cctaaaggttatacttcagcccagtacctgcaagaattatgtcaagctggattaaaaaag
agggcccaagaaaaccagatcgggaatttaaaaccttaccaaaaacgtttggatcatgag
ttagccgtcattgagcgtatgggatttgatgactattttttagtagtctgggatgttact
catttcgcgcatgaacatcaaataatgatcggcccaggacgaggatctgcagctggttca
ttagtcgcttatactttaatgatcactgacgtggatcctatacaatataatctactgttt
gaaaggtttttgaatgaagagcgcgtgcaaatgccagatatcgacttagatattcctgat
ttaaaacgtgatcaggtcataaaatatgttcataaaaagtacggtcacgagcaaatggca
caaatcattacttttggtaccctggcagctaaacaggcgctgcgtgatgtgggtcgtgtg
atgggtgaaacaacttatgaaatggaccaatggagtaaagcaatcccgtcagttttgcat
attacacttgcagaagcctatcaaaaatcacaaagattacagaacttagttgcagatagt
caaaaaaacgaactgatttatagaacagccacacacttggaaggcctgccgcgtcattat
tctttacatgctgctggggtgattttaagtgaacaaaaactctcagacctagttcctgtt
caattgggacctgatgaaatgctggttacgcagtttgctaaagatcaggtggaagaagtt
ggcttattaaaaatggattttcttggtttgcgtaacttaacgattttagaaaattcattg
cgttttattgccattggctgtcagcaaaaattagatattcatcagatagatcttaaagat
ccaccgacattggccctctttcaaaaggcagacacgaatggtgtttttcagtttgaatct
gatggtatccgtaatgttctcagaaagttggttccaacttcatttgaagacattgcagcc
gttaatgctttatatcggccgggaccaatgaataatatcgatgaatttattgcgcgtaag
catggacaaaggcgagtgacttaccctgatccttctttgaaaaaaattctcgaaccgaca
tatgggatcatggtttatcaagagcaggtcatgcaagttgcttcagcgatgggcgctttt
tctcttggtcaggccgatcttttacgacgtgcgatgagtaaaaagaaacatgacgtgatc
tctgagatgcagcaaaaatttattaatggagctaccagcaaagggtttgactctcaaaca
gctgagaaagtttatgactatattagccgttttggtgattatggctttaatcgctctcat
gcggttgcatattctaaaatggcttttgaattagcttatgtaaaatgccactatccggca
gctttttatgcagcattattaaactctgtgatcggttcagacaagaagatcaagacatat
cttacggaagctaaaagccgtcagatcaaagtccacgcaccagcaatcaatgaaagtgaa
atttattttattttaaaaaaccatgccatttattttggcttgggttgtataaaaacagtt
cggcgaaatttcgtgcatgcaatcattcaggaaagaaaagctcatgggccttatcgcact
tttaataattttttacagcggatcccagcagagtttttaaagcaggaaggtattgaggcg
ttgatttatagcggagcttttgatgaattagaaccttcacgggcaaaattgcttgaccaa
ttgcctaaaatgctgaaaaatgctgaattgagtggtgctaatgttgaattatttgaaatg
ttagcgcctaaggctgaagaaactgtgcctgaattatcggaagaagaacgacttaacaaa
gaaaattattatttaggtgcctttttatcaggacatccagtcgaaaaatttcccaattta
atgcagacataccacaccgctaaggttagcgagatccgggcaggacaaagtgttactact
attgtttatgtaaagaaaataaagaccatccgaacaaaaaaaggtgagcaaatggttttt
gtcacggccgacgatgaaactggaacgatcgatctcactgtttttccccagcagtttcgg
cagtatgggtctaaattatctgaaggtgtagtagtgatggtcaagggtaaagtagaagaa
cggcgaggactccagttattagtcagctccctaaatctagctcaggatgtgattaagcag
cgttactttcttcgcttacccaacgggagttctgtccagaaaaagcaagaattgaaaaga
ttgctcgaagtttttcatggaaaagtaccagtgatcgtctatgatgaacattcaaatcgt
aaggtcctattgagtgaagagctttggctcagtactgatgatagagcacaacaggaagtt
atcaagctattaggcgaaagtaatgttgttttgaaataa
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