Ligilactobacillus acidipiscis: LAC1533_1223
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Entry
LAC1533_1223 CDS
T05349
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
laca
Ligilactobacillus acidipiscis
Brite
KEGG Orthology (KO) [BR:
laca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
laca03032
]
LAC1533_1223
03400 DNA repair and recombination proteins [BR:
laca03400
]
LAC1533_1223
Enzymes [BR:
laca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LAC1533_1223
DNA replication proteins [BR:
laca03032
]
Prokaryotic type
DNA Topoisomerases
LAC1533_1223
DNA repair and recombination proteins [BR:
laca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LAC1533_1223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
HypA
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
SFV40643
UniProt:
A0A1K1KP43
LinkDB
All DBs
Position
I:1342947..1345067
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AA seq
706 aa
AA seq
DB search
MPTSTQPKTKTKKKRSTRKTKKNLVIVESPSKAKTIEKYLGSRYKVMASLGHIRDLPKSK
MGIDVENDYEPHYISIRGKGDVIKELRKEAKKAAHVYLAADPDREGEAIAWHLSYLLGLD
PKDKNRVVFNEITKDAVKNAFKNPRAIDMSLVDAQQARRILDRLVGYSISPLLWSKVKKG
LSAGRVQSIALNLIIQREKEIKEFVPEEYWNIDSQFQKGRSKFDASFYGLAGKKTALNNN
DAVQKVLKKISKDDPFKVAAVVKKERKRFPALPFTTSTMQQTANNTLKFRTQRTMMIAQQ
LYEGINIGRGGSVGLITYMRTDSTRISTVAKHEAAKFITETYGGEYAASKPRAGKLSENA
QDAHEAIRPSSVMRTPDSLEKYLSKDQMKLYSLIWSRFVASQMTPAIVDTVRADLVQNGV
TFRANGSKMKFPGYTKVYSESKRKDNILPELNEGDEVTLVKNDPSQHFTLPPARYSEATL
IKTLEENGVGRPSTYAPTLSTIQKRYYVKLTARKFEPTELGEIVNSMITDCFPDILDVSF
TADLEDELDQIEEGKQEWVQVIDQFYRPFAKEVASAEQKLEKVKIKDEPAGFNCDVCGAP
MLIKMGRYGKFYACSRFPDCRNTKAIVKKIGVTCPKCGKGDVVERKSKKNRIFYGCSRYP
DCDFISWDQPVGRKCPKCDHFLVYKKSKKGAQVKCPNGDYEEELQK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgccaacctccacacagccaaaaactaagacaaaaaagaaaagaagcactaggaaaaca
aaaaaaaatttagtgatcgttgaatctccgtcaaaagccaaaacaatcgaaaaatatttg
ggatcacgctataaagttatggcaagtttaggacatatccgtgatttgccaaaaagtaag
atgggtatcgatgttgaaaatgattatgaacctcattatatttcgatccgcggcaaaggc
gatgtgattaaggaactgcgcaaggaggctaaaaaagccgcgcacgtttatcttgcggcc
gatcccgaccgtgaaggagaagcaattgcttggcatctttcctacttgctaggattagat
cctaaagacaaaaatcgtgttgtctttaacgagatcaccaaagatgcagtaaaaaatgca
tttaagaatccccgggcgatcgatatgtctcttgttgacgcacaacaggctcgccggatc
ttagaccgcttggttggatattcgatttctccgttattatggtcgaaggtcaaaaaaggg
ctctctgcgggtcgagtacagtcgattgcgttaaacttgatcattcaaagagaaaaagaa
atcaaagaatttgttccagaagagtattggaacatcgactcgcaatttcaaaaaggacga
agtaaatttgatgccagcttttatggacttgctggtaaaaaaacagctttaaataataat
gatgcagttcaaaaagtcctgaaaaaaatctccaaagatgacccatttaaagtagctgca
gttgtcaaaaaagaacgtaaacgattccctgcattgccgtttacaacctcgacgatgcaa
caaacggcaaacaacacattaaaattcagaacgcaaagaacaatgatgatcgcccaacaa
ttatatgaagggatcaacattggccgcggtggttcggtcggtttgatcacttatatgcgg
accgattcaacccggatctctacggtagctaagcatgaagcagcaaaatttatcactgaa
acgtacggcggtgaatatgcagcttccaagccgcgagccggtaagctttctgaaaatgct
caagatgcccatgaagctatccggccttcctcggtaatgcgaacaccggactctctggaa
aaatatttatctaaggatcaaatgaagttatattcattgatctggtcacgttttgttgcc
agtcagatgacacctgcaatagttgataccgtccgtgctgacttagttcaaaatggcgtg
actttcagggcaaatggttcgaagatgaaatttcctggatacactaaggtttattccgaa
tccaaacggaaagacaatattttacctgaactaaatgaaggcgacgaagtcactttagta
aaaaatgacccgagtcagcattttactttgccaccggcccgttattccgaagcaactttg
atcaaaaccctagaagaaaacggtgtcggtcgtccttcaacttatgcaccaactttaagc
acgattcaaaaaaggtactatgttaaactcacagcacgtaagtttgaaccaaccgaatta
ggtgagatcgtcaattccatgatcacggattgttttccagacattttggacgtatcattt
accgcagatttggaagatgaattggatcaaatcgaagaaggtaaacaagaatgggtccaa
gtgatcgatcaattttaccgtccgttcgccaaggaagtcgccagtgctgagcagaaactt
gaaaaagttaagatcaaagatgaacctgctgggtttaactgcgacgtctgtggcgcacca
atgctgatcaaaatgggacgttatggtaaattttatgcttgcagccgttttcctgactgt
cggaatactaaagccattgtcaagaaaattggtgtaacttgtccgaagtgtggtaagggt
gatgtggttgaaagaaaatctaagaaaaaccgaattttctatggttgttcacgttacccc
gattgtgacttcatttcttgggaccaaccagttggacgaaaatgtccaaaatgcgaccat
ttcttggtttataaaaaatcgaaaaaaggtgcgcaagtcaaatgtccaaatggcgactat
gaagaagaactacaaaagtaa
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