Ligilactobacillus acidipiscis: LAC1533_1685
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Entry
LAC1533_1685 CDS
T05349
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
laca
Ligilactobacillus acidipiscis
Pathway
laca03420
Nucleotide excision repair
laca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
laca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LAC1533_1685
03430 Mismatch repair
LAC1533_1685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laca03400
]
LAC1533_1685
Enzymes [BR:
laca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LAC1533_1685
DNA repair and recombination proteins [BR:
laca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAC1533_1685
MMR (mismatch excision repair)
Other MMR factors
LAC1533_1685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
APAF1_C
ResIII
AAA_22
Ned1_M
Motif
Other DBs
NCBI-ProteinID:
SFV41106
UniProt:
A0A1K1KQE2
LinkDB
All DBs
Position
I:complement(1834743..1836971)
Genome browser
AA seq
742 aa
AA seq
DB search
MGQNNLLDKMNDKQAQAVRCTEGPLLIMAGAGSGKTRVLTHRVAYLIQEKNVLPWHVLAI
TFTNKAAREMRERVDKLLGEAGSDIWVSTFHALCVRILRREAEKIGFNRSFTIASPSEQR
TLMKHILADLNVDTKRYDPRMVLSNISNAKNDLLTVDDYKKNAESPVEQITAQAYEKYQE
ELRKDSAMDFDDLIMQTIELFTKDRETLEYYQRKFQYIHVDEYQDTNEAQYRLVGMLAEG
SRNLCVVGDADQSIYGWRGANMENIMNFEKDYPDATVVKLEQNYRSTKTILDAANSVIKN
NVNRKVKTLWTENKAGDKIHYYRGMNANDEAYFVVKNIQQKIREEGRKYNDFAILYRTNA
QSRVMEETFVKTNIPYKIVGAHRFYDRKEILDILAYLRLATNPQDSMSFNRVVNEPKRGI
GQASLDKLNDFAAMNGLSMLEAAENVVMTNVTGKAAKQLEKFAKLMRDLHEMEKSATVTE
LTDAILDRAGYRQALKKTQSLENESRLENLDEFLTVTQQFDSSWQEDEEHEDPFVDFLAE
LSLVSDQDSVDEEQNEVTMMTLHAAKGLEFPVVFLIGMEEGIFPLSRAMTDEDELEEERR
LAYVGITRAQQELFLTNAFSRMLYGRKQNNPTSRFIEEIDDDLLQSENEQRTSSTGFTQH
RTARQINPYKQASLRPGTVTKPTTTGAEKKAWNVGDKVFHKAWGEGTVVKVSGEGENTEL
DIAFDSQGIKRLLASFAPISKR
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
ttgggtcaaaataacctactagacaaaatgaatgataaacaagcacaagcggttcgctgt
acagagggaccgcttttgatcatggctggagcaggcagtggtaagacgcgtgttttaacg
catcgggtcgcttatttgatccaagaaaaaaatgtcttgccgtggcatgttttggcgatc
acttttaccaataaggctgcgcgagagatgcgtgaacgtgttgacaagttattaggagaa
gccggctcggatatttgggtctcgactttccatgctttgtgtgtgcggatcttacggagg
gaagctgaaaaaatcggttttaaccgttcgtttacaattgccagtcctagtgagcagcgg
acgttgatgaaacacattctagctgatctgaatgttgatactaagcgctacgatcctcgg
atggttttaagcaatatttcaaatgctaaaaatgatctgttaacggtcgatgattataag
aaaaatgctgaaagtcccgtggaacaaatcacggcacaggcttatgaaaaatatcaagaa
gaattacgtaaggactcggcgatggactttgacgacctgatcatgcaaacgatcgagtta
tttacaaaagatcgtgaaactttggagtactaccagcgtaaattccagtatatccatgtt
gatgaataccaggatactaacgaagctcagtatcgtttggtcggcatgttggctgaaggt
tcccgtaacctttgtgtcgtgggtgatgcagaccagagtatctatggttggcgtggtgct
aacatggaaaatattatgaattttgagaaagactatccagatgccacagtcgttaaattg
gaacagaattaccgttctactaagacgatcttggatgctgctaactcagttatcaaaaat
aacgttaaccgtaaagtcaaaactttatggactgaaaataaggctggcgataagatccac
tattatcgcggcatgaacgctaatgatgaagcttattttgtcgttaaaaatattcagcaa
aagatccgtgaagagggcagaaagtacaatgattttgccattctttatcggactaatgca
caatcgcgtgtgatggaagaaacatttgtcaaaaccaatattccatataagatcgtgggc
gctcatcgtttttatgatcgaaaagaaatcttagatattttggcatacttgcgtttagca
actaatccgcaagattcgatgagttttaatcgggtagtcaatgaacctaaacgtgggatc
ggtcaggctagcctggataaattaaacgactttgccgctatgaacggtttaagtatgttg
gaagctgctgaaaatgttgtgatgactaatgtcacgggcaaagctgctaagcagttagag
aagtttgctaagttaatgcgcgacttgcacgagatggaaaaaagtgcgaccgtgacggaa
ctgactgatgcgatcttagatcgtgccggttaccgtcaagctttgaagaaaacacagtcg
ctggaaaacgaaagtcgtttggaaaacttggacgaattcttgactgtgacccaacaattc
gattcatcctggcaagaagacgaagaacatgaagatccattcgttgacttcttggccgaa
ctgtcgctggtttctgaccaggacagtgtcgatgaagaacaaaatgaagtgacgatgatg
actcttcatgctgctaagggcttggaatttccagtagtcttcttgatcggaatggaagag
gggatcttcccgttatcccgtgcaatgaccgatgaagatgaactggaagaggagcgccga
ttagcgtatgtcggtattacccgcgcgcaacaagaattatttttgactaatgctttttca
cggatgttatatgggcgcaaacaaaataacccaacttctcgttttatcgaggagatcgat
gatgacctcttacagtcagaaaatgaacagcggacgtcgagtaccggcttcacacagcat
cggactgctcgtcagatcaacccttacaagcaagcttcactaagaccagggaccgtgacg
aagccaactacgaccggagccgaaaagaaggcttggaacgtgggcgataaagtcttccac
aaggcttggggtgaaggaacagtcgtgaaagtcagcggtgaaggtgaaaataccgagctg
gatattgcttttgattcgcaaggtatcaaacgtttgctggcatcctttgcgccgatcagt
aaacgctag
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