Ligilactobacillus acidipiscis: LAC1533_1772
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Entry
LAC1533_1772 CDS
T05349
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
laca
Ligilactobacillus acidipiscis
Brite
KEGG Orthology (KO) [BR:
laca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laca03400
]
LAC1533_1772
DNA repair and recombination proteins [BR:
laca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LAC1533_1772
Archaeal homologous recombinant proteins
LAC1533_1772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
CRISPR_Cas2
DUF5906
Motif
Other DBs
NCBI-ProteinID:
SFV41195
UniProt:
A0A1K1KQL0
LinkDB
All DBs
Position
I:complement(1925929..1929057)
Genome browser
AA seq
1042 aa
AA seq
DB search
MKPIKLRMQNFGPYVDETVDFGDFFDAPVFLISGKTGTGKTTIFDAMCFALFGRTSGGER
DAEEMRSDFASDQELTEVSFIFEDHKKSYQITRSPKQTVASRRGNGQTVRAAKVSLIYQD
PTGEKREIDKINQANQFINNLLNLTAEQFSQIVLLPQGQFRNFLAADSNDKETVLRELFG
TEFYQRFVENIKDRTKERRNAAKQQLDHLHDLQKVANFDEPEKVDPEQPVLDWLDLLAAQ
LKLQNEQLNKYKAENDVNERKKTQLDRLYQAQQSLLADQQKLVQYQQEAKKLQEKEAEIT
KLKKHVQDLEWADQQQGTLKDLTDSAAQQIKLKAEQENGKQRQGELKSALAEIEQKQSMI
KANEPQILAFQGKVERLKDKVNLYQEVERLHQQQRRIATQVKLAQEKVANAQKELTESKQ
KQQELTKKLETYADLHQQALQLQEQKQRVHNFEQHLQELQQSIYKKEQTTQQIADLKKEL
TELRLAAKAAQDKYNEMDSQYAADQIVLLAARLKPGTPCPLCGSTEHPHPAANVAVAKPV
TKQQVQTAQKEAQQAAAAVNTKWGTLEARSNYVDQQSKEIQTQQEKLADNLSLAADSSLD
KVVQAIEEKRKQLEQDGQKQEKRQAENDAMTTQLASLQVEQPQIETKGKAAAEKYTQLQI
TKEKLQTECEQKQAQLPPEYASSRELKSQLDSWQEKISAHQHEKEQVQQQLSSLNEQLAG
VESGFRERAKQQAEAIEKHENARQKLVQACLAYNEQMDLRKLTALNSELSTLSQLRDQIQ
GYQQEVTINQTTQKQLKQRIAGQPQPQIAETKKEIQQLQVKQDELFQKRSLVNHRFNQNK
ETYQHVSEIWQQYQNELEQDQQWNQLADVVSGKGKLKLNIERYVLQSYFKQVLEVANQRF
AELTGGRYSFCLDKKTGSYASNTGLELDIYDDNAGKIRSVHTLSGGESFIAALCLALALG
EVVSAQAGGVSVEALFVDEGFGSLDTDSLQVALDALRAIEGENRLIGIISHVTELRTEIP
DQLHVLSDNGRSVIKYEHEFEQ
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattaaactccgtatgcaaaactttgggccgtatgtggatgagaccgttgat
tttggcgattttttcgatgcgccggtttttttgatcagtgggaaaacaggaacaggcaaa
acaacgatttttgatgccatgtgttttgccttgtttgggcgcacgtccggcggtgaacgt
gatgccgaagaaatgagatctgattttgcgagtgatcaagaactgaccgaagttagcttt
atattcgaagatcataaaaaaagttatcagatcactcgttcacccaagcaaacagttgct
tctagacggggtaatggtcagactgttcgggctgctaaggtttctttgatctatcaagat
ccgactggtgaaaaacgcgagatcgacaagatcaatcaagctaatcagtttatcaataat
ttattgaatcttactgcggaacagttttcgcagatcgtattactgccacaaggtcaattt
cggaattttttagcggctgacagtaatgataaagaaaccgtgttgcgggaattattcggc
acggaattttatcagcgctttgtggaaaacatcaaggatcggaccaaagaaagaagaaac
gctgccaaacagcagcttgatcacttgcatgacctgcaaaaggtagctaattttgatgag
ccggaaaaagtggatccagaacaaccagtattagattggttagatttattggctgcacag
ctcaagttacaaaacgaacagctcaacaaatacaaggccgaaaatgatgttaacgagcga
aagaaaacacaactggatcgtttgtatcaagcacagcagagtttgttagctgatcaacag
aaactggttcaatatcagcaagaagccaaaaaacttcaggaaaaagaagcagagatcaca
aagttaaagaaacatgtccaagatttggaatgggctgatcaacagcaggggactttgaaa
gacctgaccgattctgctgctcaacaaatcaagttgaaggctgaacaagaaaacggaaaa
cagcggcaaggtgaactaaaaagtgccctggcagaaattgaacaaaaacaatctatgatc
aaggctaatgagccgcaaattcttgcatttcagggtaaggttgaaaggctaaaagataaa
gtcaacctgtatcaagaggtagaaagactccatcagcagcaaagacgtattgcgacccaa
gttaagcttgcgcaagaaaaagtcgcaaacgcccaaaaagagttgactgaaagcaagcaa
aaacaacaagaactaacgaaaaaattggagacttatgctgacttacaccagcaagcactt
caactacaagaacaaaaacaacgagttcataatttcgaacaacatttacaagagctgcaa
cagtctatttataaaaaagaacagaccacacagcagatcgcggacttaaaaaaagaactc
actgagttacggttggcggccaaggctgcccaggacaaatataatgagatggattctcaa
tatgcagcagatcaaatagtgctcttggcggctcggttaaaaccgggcacaccttgtcct
ttgtgcgggtcgactgaacatccgcatccggctgcaaatgttgcagttgcaaaacctgtg
acaaaacaacaggtccaaacggcacaaaaagaggcccaacaagctgctgcagctgttaat
actaagtgggggactcttgaagcccgcagtaattatgtggaccaacaaagtaaagaaatt
cagacacaacaagaaaaattagctgataatttgtcattagcggctgattcaagtttggat
aaagtggttcaagcgatagaagaaaagcgtaagcagttagagcaagacggtcaaaaacaa
gaaaaacgccaggccgaaaatgacgcgatgacaacgcaattggcttcattgcaagtagag
cagccgcaaatagagactaaaggcaaagctgctgctgaaaaatacactcagttacagatc
actaaggaaaaattgcaaactgagtgtgagcaaaaacaggcgcaactcccgccagaatat
gcctccagtcgggaactcaaatcgcagttggattcctggcaagaaaagatcagtgctcat
cagcacgaaaaagaacaggtgcaacagcagctgtcttcgttaaatgaacagttggctgga
gtagagtctgggtttagagaacgggcaaaacaacaagctgaagcaattgagaaacatgaa
aatgcacgtcaaaagctggtccaagcctgtcttgcctataatgagcagatggatctaagg
aagctcacagctttaaacagtgaattaagtacgctaagtcagctcagagatcagatccaa
ggctaccagcaagaagttactatcaatcaaactacacaaaagcagttgaaacagcggatc
gcaggccaaccgcagccgcaaatcgctgaaaccaaaaaagaaattcagcagttgcaagtc
aagcaagacgagttatttcaaaagcggagtttggtcaatcatcggtttaaccaaaacaag
gaaacgtatcaacatgtcagtgagatctggcagcaatatcaaaatgaattggaacaagat
caacaatggaatcaattggccgatgttgtttctggtaaaggcaagttgaaattaaatatt
gaaagatatgtcttacaaagctactttaagcaggtcttagaggtcgctaaccagcgtttc
gctgaattgactggcggccgctatagcttttgcttggataaaaagaccggcagttatgct
tcaaataccggattagagcttgatatttatgatgataatgccgggaagatccgttcagtt
catactttatccggcggtgaaagttttatcgcggctttatgtttggctttggctttgggc
gaagttgtttctgctcaggctggcggtgtgagtgtagaagcactattcgttgatgaaggt
tttggttcgttagacactgatagtttacaggttgctttggacgctttgagggcgatcgaa
ggtgaaaatcgcttgatcgggatcattagtcatgttactgagctgcggacagagatccct
gaccaattgcatgttttgtcggataatggccggtcagtcatcaaatatgaacatgaattt
gagcagtga
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