Ligilactobacillus acidipiscis: LAC1533_1807
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Entry
LAC1533_1807 CDS
T05349
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
laca
Ligilactobacillus acidipiscis
Pathway
laca03420
Nucleotide excision repair
laca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
laca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LAC1533_1807
03430 Mismatch repair
LAC1533_1807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laca03400
]
LAC1533_1807
Enzymes [BR:
laca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LAC1533_1807
DNA repair and recombination proteins [BR:
laca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAC1533_1807
MMR (mismatch excision repair)
Other MMR factors
LAC1533_1807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
UvrD_C
SLFN-g3_helicase
AAA_30
DEAD
AAA_16
NACHT
AAA_12
Motif
Other DBs
NCBI-ProteinID:
SFV41230
UniProt:
A0A0R2K1E4
LinkDB
All DBs
Position
I:complement(1964993..1967296)
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AA seq
767 aa
AA seq
DB search
MSLTIKQKEQRRMDEVVAKIKQAEKKSQANIDSAGKDQQAIMNDFKNNVRIKTGTYSGMM
ETSLTVRQQQTMLQERENNWRQATRQLDVLQRLEKTPYFARIDFQENGESKPESVYIGLS
SFTDTPDHFLIYDWRAPISSIYYEGGLGQVSYETPDGRQNVELTLKRQFMVEDGTILTVF
DTDETVGDQMLLEVLDESSDTKMKSIVSTIQKEQNKIIRDTKSDLLFVQGAAGSGKTSAV
LQRVAFLLYRYRGNLNSSQVILFSPNQLFNDYINEVLPELGEQNMVQMTFYQYAKRRVPR
LHVETLQERFEESNDEQERKAKNLKDSLSFFKATNAYADFLNSNGMHFKNIMFHGKPFFS
KEQIKEIYYSFNSNYNLRNRLAATREFLLKKLSSKVNREARTERVQKAVQDLGQDELNDL
YGDHPRNFANGDKEITFLTKEYVTREFQTIKRAITRNRFININGQYVHFLRHLPDLLDLS
EFGLAENEWQKTVEKTIATMKNGSISVTDVTAYLYLFDQIIGKRGDLEMRQVFIDEIQDY
SAYQLALLKEEFPRAKFTMLGDLNQSIFTQESSHSLLNELSTMFEPDKTQVVQLTKSYRS
TQQITDFSKDILHNGEEVEAFDRAGDLPTVTVDSNEQRMVQDVATQLDRNKEDKMTTAII
TKSLQETEELTANLKELGQSVTAIKTENQRLVPGTIIVPSYLAKGLEFDAIIVWNANEAN
YHREDERQLVYTICSRAMHRLNIFSAGKLTPLMADIPTERYELIDRL
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttgactattaaacaaaaagagcagcggcgaatggatgaagttgttgcaaaaatc
aagcaagcagaaaagaaaagccaggccaacattgatagtgccggcaaggatcagcaggcg
atcatgaatgatttcaaaaataatgtgcggatcaaaacggggacatattcaggcatgatg
gaaacgtctttgacggtccgtcagcaacaaaccatgctgcaagaaagagaaaataattgg
cgtcaggcaacgcggcagttagatgtgctgcaacgtttggaaaaaacgccgtattttgcg
cggatcgatttccaagaaaatggtgaaagcaagccggaaagtgtttatattgggctgagt
tcttttacggacacgccggatcactttttgatctatgactggcgcgcaccgatctcaagt
atctattatgagggcggattagggcaggtgtcttacgaaacacccgatggcaggcaaaac
gttgaattgacattgaaacgtcagtttatggttgaggacggcacgatcttgacagttttc
gacacagatgagacagtgggcgaccagatgttgttggaagttttagatgaatcttctgat
actaagatgaagagtattgtgtcgaccattcaaaaagaacaaaataagatcattcgcgat
actaaatcagacttgctgtttgttcagggtgctgcagggtctggaaaaacgtcggcagtc
cttcaacgtgtagccttcctcttgtaccgctatcggggcaatttaaattccagtcaggtg
atattattttcgccaaaccagttatttaatgactatattaatgaagttttaccagaactc
ggtgaacaaaatatggtccaaatgactttctatcaatacgctaaacggcgggtgccgcgg
ctccatgttgaaaccttacaagaacgttttgaagaaagcaatgacgaacaggaacgaaaa
gctaagaacttaaaggatagtttaagtttctttaaggctactaatgcctacgctgacttt
ttgaatagtaacgggatgcactttaagaacatcatgtttcacggtaagccgttctttagc
aaagagcagatcaaagaaatttattacagctttaacagcaattacaatctgcgcaaccgt
ttggcagcgacgcgtgaatttttgctgaagaaattaagcagcaaggtcaaccgtgaggca
cggacagaacgagttcaaaaagcggtccaagatttaggccaagatgaactgaatgactta
tatggtgaccatccgcgcaactttgccaatggtgacaaggaaattacttttctgaccaaa
gaatatgtcacgcgcgaatttcaaacgatcaaacgggcgatcacccgcaatcggtttatc
aatataaacggtcagtatgttcatttcttgcgacacttgcctgatttgttggacctaagc
gagtttggcttggctgaaaatgagtggcaaaaaacagttgaaaagacgatcgccacgatg
aaaaacggcagcatttctgtaacagacgtgaccgcttacctctacttgtttgaccagatc
atcggcaagcggggcgacctagagatgcggcaggtctttattgatgagatccaggattat
tcagcttaccagttagccttattaaaggaagaatttcctcgggctaaattcacgatgttg
ggtgatttgaaccagtcgatttttacgcaagaaagcagccattcactgttaaatgaatta
agtacgatgttcgaacctgataagacgcaagtggtacagttaacgaagtcttatcgttcg
acgcaacagatcactgatttcagtaaggatattttacacaatggcgaagaagttgaagct
tttgatcgggcgggcgatttgccgacagtcacggtcgattccaatgagcagcgcatggtt
caagatgtagctactcagttagaccgtaataaagaagataagatgaccacagctatcatc
actaagagtttgcaggaaactgaagaactgacagctaacttgaaggagttaggtcagtcc
gtgactgcgatcaaaactgaaaatcagcgtttagtcccaggaacgataattgtgccgtct
tatttggctaaaggcctggaatttgatgcgatcatcgtctggaatgcgaatgaggcaaat
tatcaccgcgaggatgaacgtcagttagtctacacgatctgttcacgcgcaatgcatcgt
ttgaacattttctccgctggcaagttaacgccattgatggccgacattccaactgagcgt
tatgaattgatcgatcggttgtaa
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