Lactobacillus sp. IBH004: LDX54_00275
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Entry
LDX54_00275 CDS
T10732
Name
(GenBank) DgaE family pyridoxal phosphate-dependent ammonia lyase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
lach Lactobacillus sp. IBH004
Pathway
lach00450
Selenocompound metabolism
lach00970
Aminoacyl-tRNA biosynthesis
lach01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lach00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LDX54_00275
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LDX54_00275
Enzymes [BR:
lach01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
LDX54_00275
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Motif
Pfam:
SelA
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
DUF316
Motif
Other DBs
NCBI-ProteinID:
UZN42017
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Position
326736..327833
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AA seq
365 aa
AA seq
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MDYYQKLNLKHVINASGKMTILGVSKTSNAGIEAQEFGDKHFFEMSDLVKKSGKYVAKLI
GAEDAVIVNSASAGIALSVAGVIGQGSQYHVYHPYSTRFKARNIIIPKGQNVDYGAPEEE
MITLGGGNVVEAGYANMCSPEHLEMMIDEDTAAIFYVKSHHAVQKSMLTVKQAVEIAHRH
NLPLILDAAAEEDLKKYLALNVDIILFSGAKAIEGPASGLAFGKAKYIDWIRIQSSGIGR
AMKIGKDNLLGLVGAIEEYVSAGPEVGTHMRKRLAPFLKKLSAIPGLTVKEAQDQAGREI
YRADIKMNADASKSAIQVVKDLKNNDPAIYTREYRANEGIIEFDIRALNSKEMDLIVERL
KEIMK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggattattatcagaaattgaacttaaagcatgtaataaatgccagcggtaagatgaca
attttaggcgtttcaaaaacaagtaatgcagggattgaagcccaagaatttggtgacaaa
catttttttgaaatgtcagatttagttaaaaagagcggaaaatacgtggctaaattgatt
ggagcagaagacgcagttattgtgaactcagcatctgctgggattgctttaagtgttgca
ggggttattggtcagggaagccagtaccatgtttatcatccatactcaaccaggtttaaa
gccaggaatattatcatacctaaaggacaaaatgtagattatggtgctccagaagaagaa
atgattactttgggtggaggcaatgtagttgaagctggctacgctaatatgtgttcacca
gaacatttagaaatgatgattgatgaagatactgcagctattttctatgttaaaagtcat
catgcagtacaaaagagcatgcttactgttaaacaggcagttgaaattgctcataggcat
aacttacctttaattttagacgccgcagcagaagaagaccttaagaaatatttggcttta
aacgtagatatcattctttttagtggtgcaaaagcaattgaaggtccagcttcaggtctg
gcatttggtaaagcaaaatacattgattggattcgtatccaaagttcgggaatcggtaga
gcgatgaaaatcggtaaagacaatcttttgggattggtaggagcaattgaagaatatgtc
agcgcaggcccagaggttggcacacatatgcgtaagcgtcttgcaccatttttaaaaaag
ttgagcgcaattcctgggcttacggtcaaagaagcacaagatcaagcaggaagagaaatt
tatcgtgccgatattaaaatgaatgctgatgcatcaaaaagtgcaattcaagtagttaaa
gacttgaaaaataatgatcccgctatttatactcgagaatatcgtgctaatgaaggaata
attgaatttgacatcagagcgctcaattcaaaagaaatggatttaatagttgaaagatta
aaggagattatgaaataa
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