Lactobacillus sp. IBH004: LDX54_00640
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Entry
LDX54_00640 CDS
T10732
Name
(GenBank) GntR family transcriptional regulator
KO
K03492
GntR family transcriptional regulator, regulator of glucomannan utilization
Organism
lach Lactobacillus sp. IBH004
Brite
KEGG Orthology (KO) [BR:
lach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lach03000
]
LDX54_00640
Transcription factors [BR:
lach03000
]
Prokaryotic type
Helix-turn-helix
GntR family
LDX54_00640
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Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_36
HTH_Crp_2
HTH_11
MarR
RPA_C
TrmB
HVO_A0261_N
DUF4423
HTH_41
HTH_24
MarR_2
HTH_DeoR
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
UZN42088
LinkDB
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Position
complement(258302..259024)
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AA seq
240 aa
AA seq
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MAKAKYLGVVQTIVSRIKAGTYQPGDLLPNQQTLANELGVSRLTVKKALDGLERKGIIYK
QSGLGTFVSSAIPIRSKIDSPANVFTGLMELMKTDDIKSKIIKFSVGFPNKQIQKNLNLT
SSDPVYNIIRLRLVDDNPLVIEHTYMPVNLVPNLNTDILHSSIYNYIHQNLKLKFGHAYR
KIKATKSDEYDQKYLAAKKDDPMLELEQIVWLTNGKPIEYSISRNRYDQRDYTIIENTRF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggcaaaatatttaggagttgtccaaactattgttagtagaattaaagctggc
acctatcaacctggggacttgttacctaatcaacaaacattagctaatgaactaggagtt
agtcgattaaccgtcaaaaaagctttagacggcttggagagaaaagggataatttataag
cagtctggtttaggcacttttgtatcgagtgctatccctattcgcagcaaaattgattcc
ccggccaatgtatttaccggcttaatggaattgatgaaaacagatgatattaaaagtaaa
attattaagttctctgttggtttccctaataagcaaattcaaaaaaaccttaatttgact
agctctgacccggtttataatatcattcgactaagacttgtagatgataatccccttgtc
attgagcatacttatatgccagtcaatttagttcccaacttaaatactgatattttgcat
tcatccatatataattacattcaccaaaacttaaagctaaaatttggtcatgcgtatcgc
aaaatcaaagctactaagtctgatgaatatgatcagaaatatctggcagctaagaaagat
gaccctatgcttgaactggaacaaatagtctggttaactaatggcaaacccattgaatat
tcgattagtcgcaaccgatacgatcaacgagattatacgattattgaaaataccaggttt
taa
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