Lactobacillus sp. IBH004: LDX54_01755
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Entry
LDX54_01755 CDS
T10732
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
lach Lactobacillus sp. IBH004
Pathway
lach00270
Cysteine and methionine metabolism
lach01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lach00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LDX54_01755 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lach03000
]
LDX54_01755 (dcm)
03032 DNA replication proteins [BR:
lach03032
]
LDX54_01755 (dcm)
03036 Chromosome and associated proteins [BR:
lach03036
]
LDX54_01755 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lach02048
]
LDX54_01755 (dcm)
Enzymes [BR:
lach01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
LDX54_01755 (dcm)
Transcription factors [BR:
lach03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
LDX54_01755 (dcm)
DNA replication proteins [BR:
lach03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
LDX54_01755 (dcm)
Chromosome and associated proteins [BR:
lach03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
LDX54_01755 (dcm)
Prokaryotic defense system [BR:
lach02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
LDX54_01755 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
HTH_3
HTH_19
HTH_26
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
UZN42293
LinkDB
All DBs
Position
21876..23174
Genome browser
AA seq
432 aa
AA seq
DB search
MKITLDKDLIRQLMLEKNIKSQKELAKLMEISPGELSLILSNKFCPIKSNVEKLVNILGE
KTLGTIKIQKPRQISLFENINKKFPDEVIDTSNITPKRQFNALELFAGAGGLALGLEEAG
FQDVGLLELDHNACETLRLNRPNWNVIEEDITKITSSKNGIFNYIPENTTIDLLSGGYPC
QSFSYAGKKMGLNDTRGTLFYHYAKIMKQVKPKMFLVENVKGLTTNDNGRTLKTMINVFE
NLGYEVTYKVLNAWDYGVAEKRERLVLIGIRNDLDISYRYPKSYDYKPVLKDVLKKVPAS
KGQKYSPAKAKIMKLVPQGGYWRDLPDEVAKEYMGKSYYSGGGRTGMARRMSWDEPSLTL
TTSPSQKQTERCHPSETRPFTTREYARIQSFPDSWKFSGGVGEVYKQIGNAVAVNFGKEI
ALSVIASLNQLY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataacacttgataaagatttaattcgtcaattaatgcttgaaaaaaacataaaa
tcacagaaagagctggcaaaactaatggaaatttctccgggagaattatcattgatacta
tctaacaagttttgtccaataaaaagcaacgtggaaaaattagtgaacattttaggggaa
aaaactttgggcaccataaaaatacaaaagccaagacaaatatcgctatttgaaaatata
aataagaaatttcctgatgaagtcattgacacttctaatattacacctaaaaggcagttt
aatgcattagaactttttgctggagctggtggcttagctttgggcttagaagaagcagga
tttcaggatgtaggtttacttgaattggatcataatgcatgtgagactttacggttaaat
agacctaactggaatgtaatagaagaagacattactaaaattacgagtagtaagaatgga
atttttaattatattccagaaaatactactattgatttacttagtggaggatatccatgt
cagtcattttcctatgctggaaaaaagatgggactaaatgatacccgaggcactcttttt
tatcattacgccaagattatgaaacaagtgaaaccgaaaatgtttttagttgaaaatgtt
aagggattaactacaaatgataatggtagaactctaaaaacaatgattaatgttttcgaa
aatttaggttacgaagttacttataaggttttaaatgcatgggactatggtgttgccgag
aaacgtgaaaggctagttctaattggaataagaaatgatcttgatatatcttatcgttat
cccaaatcgtatgactataaaccagttttaaaggatgttttaaaaaaagtaccagcttct
aaggggcaaaaatattctcctgctaaagcaaaaataatgaaattagtaccacaagggggt
tattggcgagatcttcctgatgaagtagctaaagaatatatgggtaaaagttattattca
ggtgggggacgtactggtatggctagacgaatgagttgggatgaaccatctttaacttta
actacttctcctagccaaaaacaaacagagcgttgtcacccctctgaaactagacctttt
actactagagaatatgctcgtatacaaagttttcctgacagttggaaattttctggggga
gttggcgaagtttataagcaaattgggaatgctgtggcagtcaactttggaaaagaaata
gctctttcagttattgcaagcttaaatcaattatattaa
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