Lactobacillus sp. IBH004: LDX54_01830
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Entry
LDX54_01830 CDS
T10732
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lach Lactobacillus sp. IBH004
Brite
KEGG Orthology (KO) [BR:
lach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lach03032
]
LDX54_01830 (gyrA)
03400 DNA repair and recombination proteins [BR:
lach03400
]
LDX54_01830 (gyrA)
Enzymes [BR:
lach01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LDX54_01830 (gyrA)
DNA replication proteins [BR:
lach03032
]
Prokaryotic type
DNA Topoisomerases
LDX54_01830 (gyrA)
DNA repair and recombination proteins [BR:
lach03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LDX54_01830 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UZN42307
LinkDB
All DBs
Position
6225..8711
Genome browser
AA seq
828 aa
AA seq
DB search
MDNDNQGQDHRIRNVDLTSVMNSSFLDYAMSVIVARALPDVRDGLKPVQRRILYGMSELG
VTPDKPYKKSARIVGEVMGKFHPHGDSSIYLAMAHMAQDFSYRYMLVDGHGNFGSVDGDE
PAAMRYTEARMSKIAVEMLRDINKNTVDWQRNYDDSENEPVVLPARIPNLLVNGTSGIAV
GMTTNIPPHNLSEVIKGLHMLMNNPDVTTKELMKAIPGPDFPTGGTIMGRGGIYRAYETG
RGNIVVRANTNIETEKSGRERIVVTELPYLVNKAELVKKIADLARAKTIDGITGVRDESD
QTGMRVTIDIRRDASASVVLNNLFKLTQMQANFGMNMVAIVDGAPHFLSLKQMLQYYLEH
QEDVVTRRTKFELAKAEARAHILEGLQIALDHIDEIVHIIRQSQSSDIAKAALISRFGLD
DKQSQAILDMRLVRLTGLERDKVEAEYKELQAKIADYKDILAKPERINEIIYNELLDIQK
RFGDARRTKIGASEVVSIEDEDLIEKQDVLLTLTHSGYIKRMPITEFKTQNRGGKGIKGM
GVKEGDFIANLIYSSTHDMLLFFTNKGKVYSKKAYEIPEFGRTAKGLPIVNLLQLEKGEK
IQTIVNIPEDADDQYLFFITKMGTVKRTHVSEFGNIRNSGLIALTLRDGDELNNVLATDG
KQDILIGTHLGYAVRFNEQTVRSMGRTAAGVRGINLRENDYVVGSGVVKNNDEVLVISEK
GYGKRTAAAEYPTKGRGGKGIKTANITKKNGPLSGVTVIDGSQDIMVITDDGIMIRFKTK
DVSQTGRSTLGVRLIKINDNNKVASLAIVPAEEDQEVAASTENAEEQD
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggataacgacaatcaaggtcaggatcacagaataagaaacgttgatttgaccagcgta
atgaatagttcattcttggattatgccatgtccgttatcgtggcgcgggctttacccgat
gtgcgcgatggcttgaagccggttcagcgccggattctttatggcatgagtgaactaggt
gttacaccagataaaccatataaaaagtcagccagaatcgtgggagaagttatgggtaag
ttccaccctcacggtgattcctcaatttatttggcgatggcccatatggcacaagatttt
agttaccgctatatgttagttgacggccacggtaatttcggatctgttgatggcgatgag
ccggccgcaatgcgttatactgaggcgcgcatgagcaaaattgccgtcgaaatgttgcgc
gatatcaataaaaatactgttgattggcagcgtaattacgatgattctgaaaatgagcca
gtagtattgcctgccagaatacctaacttattagttaatggtacaagtggtattgccgtt
ggtatgacgaccaacataccgcctcataacttgtcagaggtgattaagggtctgcacatg
ttgatgaacaaccctgatgtcactactaaagaattgatgaaggcaattccgggtccagat
tttcctacaggtggtactatcatgggtcgcggtggcatttatcgggcctatgaaactggg
cgcggcaatattgttgttcgcgctaatactaatattgaaaccgaaaaaagcggtcgtgaa
agaatagtcgttactgagttgccatacttggttaataaagctgagctggttaagaaaatt
gcagacttggcgcgagctaagactattgatggtattactggtgtgcgtgatgaatcagat
caaacagggatgagagtcacaattgatattcgccgtgatgctagtgccagtgttgtgtta
aataatttatttaaattgacgcagatgcaggccaactttggtatgaatatggtggcaatt
gttgatggcgcaccgcattttctcagtctcaagcagatgctgcagtattacttagagcac
caagaagatgttgttacccggagaactaaatttgaattagccaaagccgaagctagagca
cacattctcgaaggtctgcaaatcgcccttgaccacattgatgagattgtccatatcatt
cgtcagagtcagtcaagtgatattgctaaggctgctttaatcagtcgttttggtcttgat
gataagcaatcacaagcgatcttagacatgcggctggtacggttaaccggtcttgagcgt
gacaaagttgaagccgaatataaagagttacaagccaagattgctgattataaagacatt
ttggcaaaaccagagcgcattaatgaaataatctataatgagctgctggatattcaaaaa
cgttttggcgatgctcgccgaactaagattggcgctagcgaagttgtctcaattgaagat
gaagatttaattgaaaagcaagacgttttactgacattaactcacagcggctacattaag
aggatgcctattaccgaatttaagactcaaaatcgtggtggtaaaggtatcaaaggcatg
ggcgttaaagaaggcgactttattgccaacctgatttattcaagtactcatgatatgttg
ctgttctttaccaacaagggcaaggtttattcaaagaaagcctatgaaattccagaattt
ggtcgtactgctaagggtctcccaatagtcaacttactgcaactggaaaaaggcgagaag
attcagactatcgttaatattcctgaagatgcggatgaccagtacttattcttcattacg
aaaatggggaccgttaaacgtactcatgtcagtgaatttggcaatatccgcaacagtggc
ttaatcgcattaaccctgcgcgatggtgatgagctgaataatgtcttggctacagacggc
aagcaagatatcctgatcggtacccacttaggttatgccgtgcgctttaatgagcaaact
gttcggtcaatgggacggacagctgccggtgttcggggaattaatttacgtgaaaatgac
tatgttgttggttctggtgtcgttaaaaataatgatgaagtcttagtgatttctgaaaag
ggctacggtaagagaacagcagctgctgaatatccgacaaagggccgcggcggtaaaggg
attaaaaccgcaaacattaccaagaaaaatggtccactttcaggcgtgaccgtgatcgat
ggcagtcaggatatcatggttatcacagatgatggtatcatgatccgctttaagacaaag
gatgtttctcaaactggacgcagcactctcggtgtgcgcttgatcaagattaatgacaac
aataaagttgccagtctggcaattgttccggctgaagaggaccaggaagtagctgcttct
acagaaaatgcagaagagcaagactaa
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