Lactobacillus sp. IBH004: LDX54_03590
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Entry
LDX54_03590 CDS
T10732
Name
(GenBank) deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
lach Lactobacillus sp. IBH004
Pathway
lach00240
Pyrimidine metabolism
lach01100
Metabolic pathways
lach01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
lach00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LDX54_03590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lach02044
]
LDX54_03590
Enzymes [BR:
lach01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
LDX54_03590
Secretion system [BR:
lach02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
LDX54_03590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
XOO_2897-deam
SNAD4
APOBEC2
APOBEC_N
Motif
Other DBs
NCBI-ProteinID:
UZN42648
UniProt:
A0ABF7RQZ5
LinkDB
All DBs
Position
complement(1568988..1569467)
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AA seq
159 aa
AA seq
DB search
MRKRIPWKQYFMMQALVIAQRSTCDRALVGSVLVKKNRIIGTGYNGSVTGQPHCDDVGHQ
LVDGHCVRTIHSEMNSLIQCARNGVSTDDTEIYVTHFPCYNCAKALVQAGVKKINYYFDY
NDSPLAIKLFKDCGVPYEQIKIDRQYVEQLAHKLEDAEN
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagcgaattccctggaaacagtactttatgatgcaggccttagtgattgctcag
cgttcaacatgtgaccgggctttggttggcagtgttttagtaaaaaagaatcgtattatt
ggcaccggttataacggttccgttacgggtcagcctcattgcgatgatgtaggtcatcaa
ttagttgacggtcattgcgtgcggacaatccattctgaaatgaactcacttattcagtgt
gcacgtaacggcgtttcaaccgatgatactgaaatttatgttacacactttccctgttat
aattgtgctaaagctttagtgcaggctggagttaaaaaaatcaattattattttgattac
aatgacagtccgctggcgattaaactttttaaagactgtggggttccttatgaacaaatt
aaaatcgatcggcaatatgtggagcaattggcccataagttggaagatgctgaaaactaa
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