Lactobacillus sp. IBH004: LDX54_03615
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Entry
LDX54_03615 CDS
T10732
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
lach Lactobacillus sp. IBH004
Brite
KEGG Orthology (KO) [BR:
lach00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LDX54_03615 (rnmV)
Enzymes [BR:
lach01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
LDX54_03615 (rnmV)
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GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UZN42652
UniProt:
A0A9Y1DSS9
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All DBs
Position
complement(1561984..1562550)
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AA seq
188 aa
AA seq
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MVLTKKQYNAVVVVEGKDDTIRLKQFFPGIETIETNGSDVPDTVLTELQELAHKREIIVL
TDPDLNGERIRRLVTKAVPTAKQAFITRKEGEPHKKGSLGVEHASKEALVRALSVLHEKK
LPSSDLTRKKYQELGLASGPNSRKLREQVGIKLRVGYGNGKQFYHRLQTFGISLAELKQA
VEEVKDEH
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggtcttaactaaaaaacaatataatgccgttgttgtcgttgagggaaaagacgatact
attcgtcttaaacaattttttcccggaattgaaaccattgaaacgaatggctcggatgtg
cctgatacagtacttactgagttgcaggaactagctcataaaagagaaattattgtcctg
acagatcctgatttaaacggcgagcgaataagacgtctagttactaaagcagtgccgacc
gcaaagcaggcttttataacgcgtaaagagggtgagcctcataaaaaaggttcacttggc
gttgagcatgcatcaaaagaggcactggtgagggcactaagtgttttacatgaaaagaag
ctgcccagcagtgatttgaccaggaagaaatatcaagaactaggtttagccagtggccct
aattcacgcaaattgcgggaacaagttggaataaagctgcgcgttggctatggcaatggc
aagcaattctaccatcgtttacagacttttgggatttcacttgcggagcttaaacaggct
gttgaggaggttaaagatgaacactga
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