Lactobacillus sp. IBH004: LDX54_04535
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Entry
LDX54_04535 CDS
T10732
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lach Lactobacillus sp. IBH004
Brite
KEGG Orthology (KO) [BR:
lach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lach03400
]
LDX54_04535 (radA)
DNA repair and recombination proteins [BR:
lach03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LDX54_04535 (radA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
AAA
Lon_C
nSTAND3
AAA_14
AAA_16
AAA_22
SLFN-g3_helicase
AAA_24
GvpD_P-loop
nSTAND_NTPase5
DUF7129
ABC_tran
NACHT
RUBY_RBDX
divDNAB
NTPase_1
RecA_N
ATPase_2
NB-ARC
HEM4
RNA_helicase
AAA_5
NPHP3_N
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UZN41051
LinkDB
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Position
complement(1372684..1374060)
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AA seq
458 aa
AA seq
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MAKLKTKYKCRSCGYISASYLGRCPNCGAWNQFEKETEAVQNRSTKGSPSRLIKKTGISE
PVKLENVKAEKEERIQTSMEELNRVLGGGIVPGSLVLIGGDPGIGKSTLMLQIMSELAGK
YKVLYVSGEESANQIKLRADRLGLPASDMMLYPETDMEDIRQQIADLAPDFVVIDSIQTM
NEPSLDSMTGSASQVREVTSELMKIAKMDAITVFVIGHVTKEGAIAGPKILEHMVDTVLY
FEGDEHHAYRILHSVKNRFGAANEIGMFEMVNNGLKEVTNPSAIFLDERLPKSTGSAIVV
SLEGTRPILAEIQALVTPTAFGYAKRTTSGIDYNRAGLLLAVLEKRGNLMLQNQDVYLTA
TGGIRLNEPAVDLAVVMAIASSYKNQEILPTDCFVGEVGLTGEVRRVNQIDARIKEAAKT
GFKRIFIPKHNMHTSLKNADIEIIPVSSIPQALKLVLG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacttaaaacaaagtataaatgtcgttcttgtggctatatttctgccagctat
ttaggacgctgtcctaattgcggtgcctggaatcagtttgaaaaggaaactgaagcggtg
caaaatcgctcaactaaaggcagccctagtcgcttgatcaagaaaaccggaataagtgaa
ccggttaagctggaaaatgttaaggctgaaaaagaagaacgcattcagactagtatggaa
gaattgaacagggttctaggtgggggcattgttccaggctccttagtcttaattggtggt
gatccaggaattggcaaatcaactttaatgttgcaaatcatgagcgaactagctggtaaa
tataaagtattgtacgtttccggtgaagaatcagctaatcaaatcaagttaagagcagat
cgcttgggactgccggctagtgatatgatgctttatccagaaactgatatggaagatatt
cgccagcaaattgccgatttagcacctgactttgttgtcattgactcaattcaaactatg
aatgaacctagcttagactcaatgacgggttcagcatcacaagtaagggaagttacaagt
gagttaatgaaaatagccaaaatggatgctattaccgtttttgttattggccatgttaca
aaggaaggggcaattgctggacctaaaattttggagcacatggttgacactgttctttat
tttgaaggtgatgaacaccatgcctaccgtattttgcattccgttaaaaacagatttggc
gcagctaatgaaatcggcatgtttgaaatggttaataatggtttaaaagaagttactaac
ccgtctgccatttttttggatgagcgtttaccgaagtcaaccgggtctgctattgttgtt
tcactcgaagggactcgtcctattttggcagagattcaggcattagttacacccactgct
tttggctatgctaaaagaactacatctggtattgattataaccgcgctggactgctgtta
gctgttttggaaaaacggggcaacttaatgttgcaaaatcaggatgtctatttaacagct
accggtggaatacgccttaacgaacccgctgtcgatttggctgtagtgatggctatagcg
tcaagctataaaaatcaggaaattttgcccacagattgttttgtaggcgaagtcggttta
actggtgaagtaaggcgagttaatcaaatagatgcgcgaattaaggaagcagcaaaaact
gggtttaagcgtatttttattcccaaacataatatgcataccagcctgaaaaacgcagat
attgaaattattccggtttcaagtattccgcaagcattaaaactggttttaggctaa
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