Lactobacillus sp. IBH004: LDX54_04655
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Entry
LDX54_04655 CDS
T10732
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lach Lactobacillus sp. IBH004
Pathway
lach03030
DNA replication
lach03430
Mismatch repair
lach03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lach00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LDX54_04655 (dnaX)
03430 Mismatch repair
LDX54_04655 (dnaX)
03440 Homologous recombination
LDX54_04655 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lach03032
]
LDX54_04655 (dnaX)
03400 DNA repair and recombination proteins [BR:
lach03400
]
LDX54_04655 (dnaX)
Enzymes [BR:
lach01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LDX54_04655 (dnaX)
DNA replication proteins [BR:
lach03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LDX54_04655 (dnaX)
DNA repair and recombination proteins [BR:
lach03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LDX54_04655 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_30
AAA_19
TIP49
AAA_24
AAA_5
AAA_assoc_2
AAA_7
AAA_2
AAA_14
AAA_16
PLDc_2
MbeD_MobD
RCF1-5-like_lid
Sigma54_activ_2
Sde2_N_Ubi_vert
Glyco_tranf_2_5
Rep_fac_C
Mg_chelatase
PIF1
AAA_18
DUF5867
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
UZN41074
UniProt:
A0ABF7RLC4
LinkDB
All DBs
Position
complement(1354096..1355901)
Genome browser
AA seq
601 aa
AA seq
DB search
MAYQALYRKWRPRTFASVIGQNDITDTLKNAIKRGTISHAFLFAGPRGTGKTSCAKIFAK
ALNCTNLQNGEPCNKCANCLAADKGAMADIMEIDAASNNGVDEIRDIRDKVKYAPTQGKY
KVYIIDEVHMLSMGAFNALLKTLEEPPEHVVFILATTELQKVPATIISRTQRYNFKRISQ
ADLEKRMKYILEQEKISYEDKALAVIAQVADGGMRDALSILDQLLSFDKNKVEYDSALEI
TGFAAKEKIEQILLAILNEDATKALSLAQTELANGASTKNILDELIEMATNALMVIKTND
SSQNFFLSDDFVDQIKEVAPERYFQLISAANTALNDLRYTNQQQIPLEVFVVECAGKKAS
TADSKNVISGSANSQNADLDLTEEIAALKKQVTALTKKVASLSKKQTRNSDQIFHLDNAA
ADRFDKNNGKGSKIKSAAKPKKANKNRKKANQQNRKQVYHVLENATKDDLTAIKNVWPDL
QSVLGVSQRALLDVLEPVAASANQVVMKCKYTLWFEKASEDGNLLDILTEEIAKFTKHNY
EIVLVPDEDWATVRKEFIQKHGKELLDKQKQKDSESEQAESDKQIVDKAKELFGDTVNVK
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaagcgttataccgcaaatggagaccgcgcacttttgctagtgtgattggt
caaaatgatattacggatactttgaaaaatgcaattaagcgcggtacaatctcccatgcc
tttttatttgctgggccacgtggtactgggaaaacttcctgtgccaagatctttgctaaa
gctttgaattgtaccaacctgcaaaacggtgaaccatgtaataaatgtgctaattgcctg
gcagctgataaaggtgcaatggcggatattatggagattgatgcggcttccaataatggt
gttgatgaaatacgcgacatcagagataaagtaaaatacgcaccaactcagggtaaatac
aaagtatatatcattgatgaagtccatatgttgtcaatgggtgcattcaatgctttgctt
aaaacccttgaagaaccgccagagcacgttgttttcatcttagctactactgaactgcaa
aaagtgccggcaacaataatatcaagaactcagcgttacaatttcaagcgtatctctcaa
gcagacctagaaaagcgaatgaagtatatactggagcaagaaaagataagttatgaagat
aaggctttggctgtgattgctcaggtagctgatggtggtatgcgggatgctttgagtatc
ttagaccaactgttgagttttgacaaaaacaaagttgagtatgattcggctcttgaaata
actggatttgccgctaaagaaaaaattgaacagattttattagcaatattgaatgaggat
gcaactaaagcattatctttagcacaaaccgaacttgctaatggtgctagtacgaaaaat
attttagatgaacttattgaaatggcgactaatgccttaatggttattaaaaccaatgac
agcagccaaaatttctttttaagcgacgactttgttgatcagattaaagaagttgctcct
gaacgctattttcaattgatttctgcggctaataccgcattaaatgatttacgttatact
aatcagcagcaaattccactagaagtatttgtagttgaatgtgctgggaaaaaggctagt
acggcggactctaagaatgttatatcagggtctgccaattctcaaaatgctgacctggat
ttgacggaagaaatagcagcattaaagaagcaagttacggctttaaccaaaaaagttgcc
agtttaagtaaaaaacaaactaggaacagcgatcagatttttcatcttgacaatgctgca
gccgaccgatttgataaaaacaatggcaaaggttctaaaataaagtctgccgcaaaacct
aaaaaagcaaataaaaacagaaaaaaggccaatcaacaaaatcgtaagcaagtttaccat
gtgttagaaaatgccacgaaggatgacctcactgctatcaaaaatgtttggcccgatttg
caatctgttttgggtgtttcgcaaagagctttgttagatgtacttgagccggttgctgct
agtgcgaatcaagtagtaatgaaatgtaaatacaccctttggtttgaaaaagctagtgaa
gatggcaatttattagatattttgactgaagaaattgctaaatttactaagcataattat
gaaatagtgctagtacctgatgaagattgggccacagtacgtaaagaatttatacagaaa
catggtaaagaattacttgataagcaaaagcaaaaagattcagaatcagaacaggctgaa
tcagataagcagatagtggataaagccaaagagttatttggtgacacagtaaatgttaaa
gactaa
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