Lactobacillus sp. IBH004: LDX54_05145
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Entry
LDX54_05145 CDS
T10732
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
lach Lactobacillus sp. IBH004
Pathway
lach00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lach00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LDX54_05145 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lach01007
]
LDX54_05145 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lach03016
]
LDX54_05145 (thrS)
Enzymes [BR:
lach01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
LDX54_05145 (thrS)
Amino acid related enzymes [BR:
lach01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LDX54_05145 (thrS)
Transfer RNA biogenesis [BR:
lach03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LDX54_05145 (thrS)
Prokaryotic type
LDX54_05145 (thrS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
tRNA-synt_His
pAdhesive_11
Motif
Other DBs
NCBI-ProteinID:
UZN41159
UniProt:
A0ABF7RLH5
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All DBs
Position
complement(1253944..1255878)
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AA seq
644 aa
AA seq
DB search
MSFAITLPDGSKKEYEDAVSVSALAHDIGTSLGKAAIGAKVNGQVVSLDYKLNKDAEVAI
ITDRDEAGLNILRATVAFVFEAVAKKAYPEIHFGEHAANEDGFLVDTDKENQIKVNELPE
LEKAIKKVIKAGNKIASSSMSKAELSEIFKDDPYKSELLKAEKDDQIHVYKLGDFIDFGF
DALLPNTGKIKQFKLLSVAGAYWKGQSSNPMLQRISGTAFFKKADLDADIKRREEIKERD
HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDKEVADGYQHVYTPVLMNVD
AYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGM
MHRYEKSGALSGLQRVREMTLNDGHTFVTLDQVQSEFSKILTLILDVYKDFDITDYYFRL
SYRDPKNTKKYFANDEMWERSQSMLKKAMDDMGLDYVEAEGEAAFYGPKLDIQTKTALGA
DETMSTIQLDFMLPERFNLTYVGQDGEEHRPVMIHRGIVGTMERFIAYLIEIYKGAFPTW
LAPVQVEVIPVNLDAHSDYAKKVRDELNKRGFRAEADLRNEKLGYKIRESQTQKVPYTLV
LGDKELKDNSVNVRRYGTEEEVAKSFDEFLREIEQDVKSYSRNE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgcaattactttgccggatggttctaaaaaggaatatgaagatgcagtatca
gtttctgctttagcacatgacataggtacatccttaggtaaggctgctattggagcaaaa
gtaaacggtcaagttgtttctttggattacaaattaaataaagatgccgaagttgcaatt
attacagacagggatgaagcaggcttaaatattttacgggctacagtagcttttgtattt
gaagcagttgctaaaaaagcttatcctgagattcattttggtgagcatgcggcgaatgaa
gatggatttttggttgatactgacaaggaaaaccagattaaagttaacgaacttccggaa
ttagagaaagcaattaaaaaggttattaaggctggaaataaaattgcatcttcttccatg
tcaaaagcggaattatctgaaatttttaaagatgatccgtataagagtgaattactaaaa
gcagaaaaagatgaccaaattcatgtatacaagctgggagacttcatcgactttggcttc
gacgcgttactgcctaatacaggaaagattaagcagtttaaattattatctgttgctggt
gcttattggaagggccaatcttctaacccaatgcttcaaagaatttccggtacagccttc
tttaaaaaagctgacttagatgccgatattaagcgtcgtgaagaaattaaagaacgcgat
cacagaacaattggccgagatcttgatttattctttgtagatcccaaagttggagctggt
ttaccttactggatgccaaaaggtgccacgattcgccgagtagttgaacgttacatcatt
gataaagaggtcgctgacggttaccaacacgtttataccccagtgcttatgaacgttgac
gcttataaaacatcaggccactgggcacactatcgtgatgacatgtttccaccgatggat
atgggtgacggggaaatgcttgaattgcgaccaatgaattgtccgtcccacatccaaatt
tataagcatcatattcgttcataccgcgagctcccaattcgcattgcagaattaggcatg
atgcacagatatgaaaaatctggtgctttgtcaggtttgcaacgcgtaagagaaatgact
ttgaatgatggtcatacatttgtaaccttagaccaggttcaaagtgaattctctaagatt
ttgactttaattctggatgtatacaaagattttgacattaccgattactacttcagactt
tcttatcgtgatccgaagaatactaagaagtattttgccaatgatgaaatgtgggagaga
agtcagtcaatgctgaaaaaggcaatggatgatatgggccttgattacgttgaggctgaa
ggtgaggctgcattctacggtcctaaacttgatattcagactaagactgctttaggcgct
gatgagaccatgtccactatccaactggacttcatgctccctgaacgctttaacttaact
tatgttggtcaagatggtgaagagcatcgtccagttatgattcaccgtggtattgttgga
actatggagcgtttcattgcttacttgattgaaatatacaagggtgctttcccaacctgg
ttagctccagttcaagttgaagtaatacctgttaacctcgacgctcattcagattacgct
aagaaagtccgtgatgagctcaataagagaggttttagagctgaagccgacttacgtaat
gaaaaattaggctacaagattcgtgaatcacaaacacaaaaagtaccgtatactcttgtt
ttaggtgacaaagaactcaaggacaacagtgttaacgttcgccgctatggtactgaagaa
gaagtagcaaagagttttgacgaatttcttcgtgaaattgaacaagatgttaaatcatat
tcacgcaatgaataa
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