Lactobacillus sp. IBH004: LDX54_05370
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Entry
LDX54_05370 CDS
T10732
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lach Lactobacillus sp. IBH004
Pathway
lach00220
Arginine biosynthesis
lach00240
Pyrimidine metabolism
lach00250
Alanine, aspartate and glutamate metabolism
lach01100
Metabolic pathways
lach01110
Biosynthesis of secondary metabolites
lach01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lach00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LDX54_05370 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LDX54_05370 (carB)
00220 Arginine biosynthesis
LDX54_05370 (carB)
Enzymes [BR:
lach01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LDX54_05370 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
GARS_A
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
UZN41201
LinkDB
All DBs
Position
complement(1212834..1216016)
Genome browser
AA seq
1060 aa
AA seq
DB search
MPKRTDIKKIMVIGSGPIIIGQAAEFDYSGTQACLALREEGYEVVLVNSNPATIMTDTTI
ADKVYIEPLTVESVSRIIRKEYPDAILPTLGGQVGLNMALSLAKSGILDELNIELLGTKL
DSIEQAEDREKFKELCQKLGEPVPPSTSVKTVQEALDFGDKIGYPIIVRPAFTMGGTGGG
ICNDRAELAKIAKNGLELSPVTECLIERSIAGYKEIEFEVMRDHDDNAMIVCCMENFDPV
GIHTGDSIVFSPSQTLSDKEYQMLRDCSLKLIRALKIEGGCNVQLALDPNSFNYDVIEVN
PRVSRSSALASKATGYPIAKMAAKIAVGLTLDEIKNPVTGTTFAEFEPALDYVVCKIPRW
PFDKFAKANRELGTQMKATGEVMAIGRTAEEAFQKAVRSLEIDQKDFYSVEAHKASDEDL
ENKLVRAQDDRLFYLAEAFRRGYSMSDLHELTKINFYFLDIVKHIVDLEKVIAANPDDLE
VLKNAKKYGFSDHTVANLWHEDEDKVRTLRKQNHLLPVYKMVDTCAGEFVSQTPYFYSTY
DTENESQKTSKKSVLVVGSGPIRIGQGVEFDYATVHCVKALQKMGYEAIVINSNPETVST
DFSVSDKLYFEPLTLEDVLNVCDLEQPEGVIIQFGGQTSINLAAGLEKHGIKILGTSVED
LNRAEDRELFDQVVKELGLKQPQGITTTTHAGVIKAAEKLGYPVLVRPSYVLGGKAMEIV
YNQPELEDYLHNHVDIASSHPILVDDYLDGRECDVDAICDGEEVLIPGIMEHIEHAGVHS
GDSMAVYPAQTFSPAIKQKIADITKKLALKLNCRGIMNLQLIERGGEIYIIEVNPRASRT
VPFLSKITSIEMAQVATRVIMGESLKEQGYKDGLAPETKMISVKAPVFSFSKLSDVDSYL
GPEMKSTGEVMGSDLSFPKALYKAFSGANMQIPDSGNILLTIEDRDKQEILPIAKRFAQI
GYRIFATSGTASFLKQNHLHITLVDKIHQHSETNILNEFKNGKIDLVINTMGHDLAKTSD
GFIIRQAAIQQNIPLITSLDTARALLTALENRSFSTISIK
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaagaactgatataaaaaagataatggtaataggttcaggtccaattattatt
ggtcaagcagcagaattcgattattctggaacacaagcatgtttggctttacgtgaagaa
ggctatgaagtggttctggttaattctaatcctgctactatcatgactgatactacgatt
gctgacaaggtttatattgagccgttaactgttgaatcagtttcccgcattattcgtaag
gaatatcctgatgcaatattgcctactttaggtggtcaagttggtttgaatatggcctta
tcgttagctaaaagcggcattctagacgaattaaatattgaactgttaggaacaaaactt
gattcaattgaacaagccgaagacagagaaaaattcaaggaactttgtcaaaaactgggt
gaaccagttccgccttcaaccagtgttaaaacagtccaagaagctttagatttcggagat
aagattggatatcccattattgtccgtcccgccttcactatgggaggaaccggtggtgga
atttgtaatgatcgcgctgaacttgcaaaaattgccaaaaatggcttggaactgtctccg
gttaccgaatgtttaattgaacggtcgattgctggctataaagagattgaatttgaagta
atgagagatcatgacgataatgccatgattgtctgctgtatggaaaactttgatcctgtc
ggtattcataccggggattcaattgttttctcaccatcacagacattatctgacaaagaa
tatcagatgttgcgtgattgctccttaaagcttattcgggcactaaagattgagggcggc
tgcaatgttcaattagccttagatccaaatagttttaattatgatgtcattgaagttaac
cccagagtttcgcgttcatctgccttggcttccaaagctaccggctatccgattgccaag
atggcagccaaaattgctgtgggtctgactttagatgaaattaaaaacccagtcactggt
actacttttgcagagtttgaaccagcattggactatgttgtctgcaagataccacgctgg
ccttttgataaatttgccaaagctaatcgcgaattgggtacgcagatgaaagcaactggg
gaggttatggcaataggaagaacggctgaagaagcctttcaaaaagccgttcgttccctg
gaaatcgatcaaaaagatttttattcagttgaagcccataaagccagtgatgaagacctc
gaaaataaactggttagagcgcaggatgatcgtcttttctacttagctgaagccttccgg
cggggttattcaatgtcggacttgcatgaattaactaaaattaatttttactttttagat
attgttaagcatattgtcgatttagaaaaagttattgccgcaaatcctgatgatctagag
gttcttaaaaatgctaaaaaatatggctttagtgatcatacagtcgctaatttgtggcat
gaagatgaagacaaagtaagaactttgcgcaagcaaaatcatttgctgccagtatataaa
atggtggacacttgtgcaggtgaatttgtttctcaaactccttatttttattctacttat
gataccgaaaatgagagtcagaaaacttccaagaagtcagtgttggtagttggttcaggt
ccaattcgcattggccagggtgtagaatttgattatgccacagttcactgcgttaaagcc
ttgcaaaagatgggttatgaagctattgtcattaattcaaatcccgaaactgtttcaact
gatttttccgtttctgacaaattatattttgagcctttaactttagaagatgtgttaaac
gtctgcgatttagagcagccagaaggtgtaattattcagtttggtggtcaaacctcgatc
aatctggcagctggtctggaaaaacatggtatcaagattttaggtactagcgtagaggat
cttaatcgagcagaagatcgagaattatttgatcaagtagtaaaagaattaggtttgaag
cagccgcaaggaatcaccactaccacacatgctggcgttattaaagcagctgagaagctg
ggctacccagttttagtcagaccaagttatgtattaggtggaaaggcaatggaaattgtt
tacaatcaacctgaacttgaagactacttgcacaaccatgttgacattgccagcagtcat
ccaattttggtagatgattacctcgatggtcgagagtgtgatgttgatgctatttgtgac
ggagaagaagtacttattcctggaataatggagcatattgaacatgctggcgttcactct
ggagattctatggccgtctacccggctcaaacattttcacctgccattaagcaaaaaatc
gctgacattaccaaaaaactggctttaaagcttaattgccgtggaataatgaatttgcag
ttaattgagcgcggtggagaaatttatattattgaagttaatccccgtgccagtcgtacg
gtgccatttttaagtaaaattaccagtattgaaatggctcaggttgctactcgggtaatt
atgggtgaaagtctaaaggagcaaggctataaagatggtctggcaccagaaacaaaaatg
attagtgttaaagcaccagtcttctcgtttagtaaactttcagatgttgatagctacttg
gggccggaaatgaaatcaactggcgaagtcatgggcagcgacttgagttttccaaaagca
ctttataaggctttttcaggagccaacatgcaaataccagacagtggcaacattttgtta
accattgaagaccgcgataaacaggaaatattaccaattgccaaaagatttgcccaaatt
ggttatcgtatttttgctaccagtggtacggccagtttcctaaaacaaaatcatttacat
attactctggttgataagattcatcagcacagtgagactaatattttaaatgaatttaaa
aatggaaaaattgatttggtaataaacactatgggacatgatttggcgaaaacttctgac
ggctttattattcgtcaagcggctattcagcaaaatattcctttaattactagcttggac
actgcccgtgcacttctaactgccttagaaaaccggtcgttttctacaataagcataaaa
taa
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