Lactobacillus sp. IBH004: LDX54_05480
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Entry
LDX54_05480 CDS
T10732
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
lach Lactobacillus sp. IBH004
Brite
KEGG Orthology (KO) [BR:
lach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lach03009
]
LDX54_05480
Enzymes [BR:
lach01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
LDX54_05480
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
LDX54_05480
Ribosome biogenesis [BR:
lach03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LDX54_05480
23S rRNA modification factors
LDX54_05480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Motif
Other DBs
NCBI-ProteinID:
UZN41221
UniProt:
A0ABF7RLW4
LinkDB
All DBs
Position
complement(1191281..1192093)
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AA seq
270 aa
AA seq
DB search
MVKKRADILLVQQGLFHSRTQAQRAIMAGLVSDHNHQRIDKSGTSFPVDEIFYIKKNDKK
YVSRGGFKLAKALKSFQIDLSDKICLDIGASTGGFTDVALQNKAKLVYALDVGYNQLAWQ
LRDDPRVIVMEKQNFRYSQLSDFTHGQPEFAMTDVSFISLDLIMPPMFQILKDGCDAVCL
IKPQFEAGPQHVGKHGVVHDHAVHCAVIKHTIEKARAIGFNVLNIDYSPIKGGKGNIEFL
IHLQKEEKDGGKLLWSGTPEEVVARAVADL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaagagagcggatattttattagttcagcaaggattatttcattcgcggact
caggctcaacgggctattatggccggattagtttctgatcataatcaccagagaatagat
aagagcggtaccagttttcccgttgatgaaatattttatatcaaaaaaaatgataagaag
tatgtctctcgtggaggttttaagcttgccaaagccttaaaatcttttcagattgattta
tcagataaaatctgccttgatatcggtgcttctactggcggttttacagatgtggcttta
cagaataaggctaaactcgtttacgcactggatgttggctataatcaacttgcatggcag
ctgcgagatgatcctcgtgtaattgtgatggaaaaacaaaattttcgttatagtcagcta
agtgatttcactcacggacagcccgaatttgcgatgacagatgtttcttttatttcgctt
gatttaattatgccgccgatgtttcagatcttaaaagatggctgtgatgcagtttgttta
ataaaaccgcagtttgaagcaggtccacagcatgtcggcaaacatggagtagtccacgac
catgctgttcattgcgctgtcattaagcatacaattgaaaaagccagagcaattggattt
aatgttcttaatattgactattcaccgataaaaggtggcaaaggtaatattgaattttta
atacatttacaaaaagaagaaaaagatggcggaaaattgttatggtctgggaccccggaa
gaagtggttgctcgggctgttgccgatctttag
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