Lactobacillus sp. IBH004: LDX54_05615
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Entry
LDX54_05615 CDS
T10732
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
lach Lactobacillus sp. IBH004
Brite
KEGG Orthology (KO) [BR:
lach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lach03036
]
LDX54_05615 (smc)
Chromosome and associated proteins [BR:
lach03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
LDX54_05615 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
Crescentin
AAA_29
TMF_TATA_bd
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UZN41247
LinkDB
All DBs
Position
complement(1159302..1162865)
Genome browser
AA seq
1187 aa
AA seq
DB search
MPLTELIIDGFKSFAEKTKIEFDTGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGSN
MKDVIFAGSEFRKPANHAEVSLIFDNKKGELNFKDDQVIVTRRILRSGDNEYLINKKNVR
QRDVRALFLDSGISQESLAIISQGRVDQVLNSRPEERRSLFEEAAGVLHFKKQKEEAKVQ
LQQTTDNLVRINDLVKELEQRIEPLHEQSSLAKEYQFQKKGLDHELKTLLAFEIQDLDKQ
KQTVQEKADQNQNLLTKLDQEVKTSQGAVADKRKEFQTLNAQKDQIQNDLFSLTKKLSEI
NTHLQVSEQSKQYNEATKKEYQSELSDLKEQVVSSRKETTNLLEEESHLKKEQEELNNKR
VGLTTQLKENPEQLNQNLERLRSNYIQLLQDQTSNNNEIVYLNSELKKLSDNTQLQTKNV
SDELKKEKAELNRLQVQGKSLKENYQNVKQQIEVLSEEQRLTQNNLLTLQTSLTTENQKF
SQLKARHDALENIRKRHEGYFYGVKNVLNNLADYHGVIGAVGELITFPAKYEVAMATALG
NGVQDLVTATKLDARDAINQLKENRAGRATFLPLDGLREYSIPSSTINTISSFSGFQGIA
SEIVKSLPGQNITPAINYLLGNTIIVDTINNALKIRQRVSRYRIVTLDGDVISPGGSMTG
GVRNQKSNSPLQTTAELGELKQKIGKLQLKIKNSEADLAVVNKKNNVLLKKVKDTQAKLQ
NLKQNLGETALSYQNQEKEVNRLKAANSLFEQQKEERDQEIDSTKKKISFAEKEKKRFQT
DISQQKQKISDLQLRIKNFTELNHDIQSKLNELDPQIAVYANKLENITKQISEKRRDANQ
QQKQISTLEQKLNELKQNDLLDHKKQTAFEQEKNDGAVKKQKLQKQLNSLSSKLGQYDAQ
INQLDQVASRNYDLRKDAAAEQKEYSVKIAQLNSQIDQRLDTLSSDYSLTYEAALHQAEK
ENTEVNRAQLQKDVKLHRMSIADIGPVNLKAIEEYDNVKKRYDFLNAQQNDLLKGRDNLE
ESMSELDQEVCNRFKSTFTAVAKSFSELFPVVFGGGSAKLVLTDPDHLLATGIEIIAQPP
GKKLQRLSLLSGGERALTAITLLFAMLKVKPVPFCVLDEVEAALDDSNVTRFANFLEEYD
MHTQFIVITHRRGTMERADQLYGVVMQESGVSQVLSVSLKELKNEVK
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
gtgccactaactgaactaataattgacggctttaaatcttttgccgaaaaaacaaaaata
gaattcgatactggtattactggcatagtgggtcctaatggtagtggtaaaagcaatatt
accgaagcaataagatgggtcatgggagagtcaagcgccaagtctttgcggggctcaaac
atgaaagacgtgatatttgcgggcagtgaatttcgtaagccggccaaccacgctgaagtt
tcccttatttttgacaacaaaaaaggtgaacttaattttaaggatgaccaggtaattgta
actcggcgaattttacggtcgggagataacgaatatttaataaataaaaaaaatgttaga
caacgagatgtccgagccttgtttctggattctggcatttcacaagaaagcttagccatt
atttcacagggacgggttgatcaagtattaaattcccgtcctgaagagcggcgctcactg
tttgaggaagcagctggagtattacattttaaaaagcaaaaagaagaagcaaaagttcaa
ttacaacagaccaccgataacctggtacgcatcaatgatttagtaaaagaactggagcaa
agaattgaacctcttcatgaacaaagttctctggcaaaggaatatcaatttcagaaaaaa
ggtctggatcatgaactaaaaactttgttagcatttgagattcaagatttagataaacaa
aaacaaacagtgcaagaaaaagctgaccaaaatcaaaatctgttaacaaaattagatcaa
gaagttaagacatctcagggtgcggtagctgacaaaagaaaagagtttcagactttaaat
gctcaaaaagatcaaattcaaaatgacttattttcgttgacaaaaaagctttccgaaata
aatacgcatttgcaagtttccgagcagagcaaacagtataatgaagctactaaaaaagaa
tatcagtccgaattaagcgacttaaaagagcaggtagtgagtagcagaaaggaaacaact
aatctgcttgaagaagaaagccatctaaaaaaagaacaagaggagctaaataataagaga
gtagggctaacgacacagcttaaagaaaacccggaacaactgaaccaaaatttagagcgg
ctgcggtcaaattatattcagttgttacaagatcaaacttctaataacaatgaaatcgtt
tatcttaattctgaactgaaaaagcttagtgataatacccaactgcaaacaaaaaatgtt
tctgatgaactgaaaaaggaaaaagctgaacttaatagacttcaggtgcaaggcaaaagt
cttaaagaaaattatcaaaatgtgaaacaacagatagaggttctatctgaagaacaaagg
ttaacgcaaaataatttattgactttgcaaacatcgcttactacagaaaatcagaagttc
agccaattaaaagcacgccatgatgcactggaaaatatccgtaaacgccatgaggggtat
ttttatggtgttaaaaacgtgctaaataatctagcagattaccatggcgttataggtgca
gtgggtgaattaattacctttcctgcaaaatatgaagttgccatggctacggctctgggt
aatggagttcaagatttagtaactgcaacaaagttggatgctcgggatgccattaaccag
ttaaaagaaaatcgtgctggacgagctacttttttaccccttgatggcttgcgggagtat
tcgatcccttcctcgacgattaatacgatttcttctttctctggctttcaaggtattgca
agtgaaatagttaaaagtttgcctggtcaaaatattacgcccgcgattaactatttgctt
ggaaatactataatagttgataccataaataatgcgctaaaaattaggcaacgcgtttct
cgctatcgtattgttacgcttgatggcgatgttatttcacctggtggttcaatgacagga
ggagtgcgcaatcaaaaaagtaattctccgcttcaaactacagcagaacttggtgaacta
aagcaaaaaattggcaaattacagctgaaaataaaaaatagcgaagcagatttagctgtt
gtcaataagaaaaataatgttctgctcaaaaaagtgaaagatactcaagcaaagcttcaa
aatctgaaacaaaatttaggtgagacagcactttcgtatcaaaatcaggaaaaagaagtc
aataggttaaaagctgctaatagtttatttgagcagcaaaaagaagaacgcgatcaggaa
attgattccactaagaaaaagattagtttcgctgaaaaggaaaaaaagaggtttcaaaca
gatatttctcagcaaaagcaaaaaattagtgatctgcaactgcggattaaaaactttact
gaactaaatcatgatattcagtccaaattgaacgagcttgatccgcagattgctgtttat
gccaacaagttggaaaatattacaaaacaaatatctgaaaaaaggcgggatgcaaaccag
cagcaaaaacaaatttctactttagagcaaaaattaaatgaacttaaacagaatgatctt
cttgatcataaaaaacagacagcttttgagcaggaaaaaaatgatggcgccgttaagaag
cagaaattacaaaagcagcttaatagtttgagttctaaactaggccagtatgatgcacaa
attaaccagcttgatcaggtggcaagccgaaattatgatctgcgtaaagatgcggctgcc
gagcaaaaagaatattctgtcaaaatagcgcaattaaatagccagatagaccagcgttta
gataccctgagttctgattactcgttaacatatgaagcagctttgcatcaagcagaaaag
gaaaataccgaagtaaatcgtgcccaactgcaaaaagatgtgaaattgcatcgtatgtct
attgctgatatcgggccagttaatctaaaagcaattgaagagtatgacaacgttaaaaaa
agatatgattttcttaatgctcaacaaaatgacttgctaaaagggcgagataatttagaa
gaatcaatgtcagaacttgatcaagaggtttgtaatcggtttaaatcaactttcactgct
gtagctaaaagcttcagtgaactattcccagttgtttttggtggtggtagtgcaaaacta
gtcttaaccgacccggatcatttgttagctactggcatcgaaattatagctcaaccacca
ggaaagaaactgcaaagactcagtttactttctggtggggaacgggcattgaccgcaatc
actcttctttttgccatgctgaaggttaagccagtgccattttgcgtgttagatgaagtc
gaggctgcgttggacgactctaatgtcactcgctttgccaactttttagaagaatatgac
atgcatacccagtttattgtaatcacacatagaaggggcacaatggaaagagcagaccag
ctttatggtgttgtaatgcaagaatcaggagtttcacaagtattatccgtttctttaaaa
gaattaaaaaatgaggtgaaataa
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