Lactobacillus sp. IBH004: LDX54_06700
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Entry
LDX54_06700 CDS
T10732
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lach Lactobacillus sp. IBH004
Brite
KEGG Orthology (KO) [BR:
lach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lach03032
]
LDX54_06700
03036 Chromosome and associated proteins [BR:
lach03036
]
LDX54_06700
03400 DNA repair and recombination proteins [BR:
lach03400
]
LDX54_06700
DNA replication proteins [BR:
lach03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LDX54_06700
Chromosome and associated proteins [BR:
lach03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LDX54_06700
DNA repair and recombination proteins [BR:
lach03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LDX54_06700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
DUF2267
DUF6927
DUF2530
Motif
Other DBs
NCBI-ProteinID:
UZN41452
UniProt:
A0ABF7RMU6
LinkDB
All DBs
Position
931984..932259
Genome browser
AA seq
91 aa
AA seq
DB search
MANKAELVTEVAAKAKLTKKDAATAVDAIFSSIQEDLAKGKKVQLIGFGTFEVRKRAARK
GRNPQTGDEIQIPASVVPAFRPGKALKEAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaggcagaattagtcactgaagttgcagcaaaagctaaattaactaaaaaa
gatgcagctacagcagttgatgcaatttttagttctatccaagaagatctagctaaaggt
aaaaaagtacaattaattggctttggcacttttgaagtgcgtaagcgcgcagctcgtaaa
ggacgtaatccacaaacaggcgatgaaatccaaattccagcaagtgttgtacctgcattt
agacctggtaaagctcttaaggaagctgttaaatag
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