Lactobacillus sp. IBH004: LDX54_08340
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Entry
LDX54_08340 CDS
T10732
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18104
ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:
7.6.2.2
]
Organism
lach Lactobacillus sp. IBH004
Pathway
lach01501
beta-Lactam resistance
lach02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lach00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LDX54_08340
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LDX54_08340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lach02000
]
LDX54_08340
01504 Antimicrobial resistance genes [BR:
lach01504
]
LDX54_08340
Enzymes [BR:
lach01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
LDX54_08340
Transporters [BR:
lach02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LDX54_08340
Antimicrobial resistance genes [BR:
lach01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
LDX54_08340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
SbcC_Walker_B
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
UZN41761
LinkDB
All DBs
Position
593592..595343
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AA seq
583 aa
AA seq
DB search
MAFGSRKDGKQNVKISDFLDLLKSLNVKKSLFIIGLLLSLVTSAANLALPLLTRQLVDTS
KWDNFNYSSLIIIIVVFVLQLVLGTLGGYVLRYFGESVVKTLRERLWAHLLKLPVTYFDA
NKVGESSSRLVNDTGIIKDLLASQFPNFITGAIQLFFSLIILFVMDWEMATLMFVVVPIV
VVILLPVGRIMVRLGRKLQAETAKFNGEVSEKLSEVRLIKSSNGEKHEQEAGNHRINKIF
TIGVLDARVEAVLQPIIMTLMMAAFAGILAFGIIRVGQGSLTSGSLVAFLLYLFNVIGPV
ANFATFFSQIQKALGSTERIQEILRIEPEKNLGQQTCDLTNKTLTAQNLNFSYVKNEPVL
QSISFVSRPNSVIAFAGPSGGGKSTIFALLERFYQPDSGKITIGKQDIQDIDLANWRCQI
GYVSQNSAIFSGTIRENLVYGLTKKMTDEDLWHGLSLAYADQFVREFPDQMETEIGERGI
KLSGGQKQRLAIARAFLRDPKILMLDEATASLDSESEGKVQQALDKLMVNRTTLVIAHRL
ATIVNADQIYFIEHGKVTGHGTHHELMQKHSLYAKYVTEQMVN
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgggtcacgtaaagatggaaagcaaaatgttaaaattagtgactttttagac
ctgctaaaaagtttaaatgtgaaaaagtctttgttcataattggtttactacttagtctt
gtcacaagtgcagccaatttagcattacctttattaaccaggcagctggtggacactagt
aaatgggataactttaattattcaagtttaattattatcattgtagtttttgtgttgcag
ctagttttaggaactttgggcggatatgtactgcgctattttggtgaaagcgtagtcaag
accctgcgtgaacgcttatgggctcacctgttaaaattacctgttacttattttgatgct
aataaagtgggtgaaagcagctcgcgactagtcaatgatactggaataataaaagattta
ctggcttcacagtttcctaattttattaccggcgcaatccaattatttttctcattaatc
attttatttgtgatggattgggaaatggccaccttaatgtttgtcgtagttcctattgtg
gtagtaattttattaccggttggtcgcataatggtgagactaggtcggaaactacaagcg
gaaacagccaaatttaatggtgaggtcagtgaaaaactatctgaggtccgcttaattaaa
tccagtaacggcgaaaaacatgagcaggaagctggtaatcaccgaatcaataaaattttc
accattggagttttagacgcacgcgtcgaagctgttttacagccaatcattatgaccttg
atgatggctgcttttgccggcattttggcttttggcattattcgcgttggtcaaggttct
ttaacaagtggttcattagtggcctttttactgtacttatttaatgttattggccctgtt
gccaattttgccacctttttctcccagattcaaaaagccttaggctcaactgaacgtatc
caagaaattttacgaatagagcccgaaaagaatttgggtcaacagacctgcgatttaact
aataaaactttaactgcacaaaatctgaatttcagctatgtgaaaaatgaaccagtttta
cagtcaatttcatttgtttcacgacccaattctgtgattgcttttgctggtcccagcggt
ggcgggaagtcaactatttttgcattactagagcggttttaccaaccggatagtggcaaa
attactattgggaagcaggatatccaagatattgacctggcaaattggcgctgccaaata
ggctatgtttctcaaaatagtgctattttttctggtacaattcgggaaaacctggtttat
ggtttaactaaaaagatgaccgatgaagatctttggcatggactttctttggcttatgcg
gaccaatttgtccgtgaatttcctgatcagatggagactgaaataggtgagcgcggaatt
aagctctctggtggtcaaaagcaacgcttagctattgcccgagcttttttacgtgatccc
aagattttaatgctggatgaagctactgcgagtctcgattcagaatcagagggaaaagtg
caacaagcactcgataaactgatggttaacagaactactttggtaattgcgcaccgactg
gcgacgattgttaatgccgatcaaatatattttatagaacacggtaaggttacaggccat
ggaacccaccacgaattgatgcaaaagcatagtttatacgctaagtatgtcaccgagcag
atggtaaattaa
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