Lacinutrix sp. Bg11-31: CW733_00510
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Entry
CW733_00510 CDS
T05225
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
laci
Lacinutrix sp. Bg11-31
Pathway
laci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CW733_00510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laci03019
]
CW733_00510
Enzymes [BR:
laci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CW733_00510
Messenger RNA biogenesis [BR:
laci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CW733_00510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrD-helicase
AAA_22
Fe-ADH
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AUC80698
UniProt:
A0A2K8XCT7
LinkDB
All DBs
Position
128299..129621
Genome browser
AA seq
440 aa
AA seq
DB search
MSFKLLGLSEPILKAISKKGYDTPSPIQAKAIPPILDGYDVLASAQTGTGKTAGFTLPML
HILSENPKEKFRPIRALVLTPTRELAAQVYANVKEYSEFLNLRSTVIFGGVNQKPQVANI
RNGVDVLVATPGRLLDLCNQGAISLKRVEIFVLDEADRMLDMGFLRDIERVMKLMPDKRQ
NLMFSATFSKEIKKLAFTILNNPVQVEATPENTAVEAITQKVYRVAKAHKTGLIIKLISE
GNWKQVLVFTRTKHGANNLTKKLIGSGISAAAIHGNKSQGARTKALKGFKDGTVRVMVAT
DIAARGLDIPLLPHVINFEIPNISEDYVHRIGRTGRAGAKGEAISLVSADETTFLRDIQK
LIGEKLPVEIMEGFEPDPNASTTPIKPGQNRQPRNSKPKAKGSGDKSKGNSNSENGGGRN
RSKNKSRGSSSDRRSSSSRS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaaattattaggcctttctgagccaatactaaaagcaattagtaaaaaagga
tacgatactccatcacctattcaagcaaaagcaattccacctattttagatggttacgat
gttttggcctctgcacaaacaggaacaggaaaaacagctggttttactttaccaatgctg
cacatattaagcgaaaaccctaaagaaaaatttagaccaattcgtgcgttggtattaaca
ccaacaagagaattagcagcacaagtatatgctaatgttaaagagtacagtgagttttta
aatttaagaagtactgttatttttggtggtgtaaaccaaaaacctcaagtagcaaatatt
agaaatggagtagatgttttggtagcaacaccaggacgtttgttagatttatgtaatcaa
ggcgcaatttctttaaagcgcgttgaaatatttgttttagatgaagcagatagaatgctt
gatatgggttttttgcgcgatatagaacgcgtaatgaaactaatgccagataaaagacaa
aatctaatgttctcggcaacgttttctaaagaaattaaaaagctagcttttactattcta
aacaatccagtacaagtagaagcaactccagaaaatacagcagtagaagcgattactcaa
aaagtatatcgcgtagcgaaagcgcataaaacaggattaataattaaacttatttctgaa
gggaattggaaacaagtattagtttttacacgtactaaacatggagctaataacctaact
aaaaaattaataggttctggtatttcagcagcagctattcatggaaataaaagtcaagga
gcaagaactaaagccttaaaaggttttaaagatggaactgttcgtgttatggttgctaca
gatattgctgcgcgtggattagatattccattattaccacacgttataaacttcgagatt
cctaatatctctgaagattacgtacatagaattggtagaacaggtagagcaggagctaaa
ggagaagctatttctctagtaagtgcagacgaaactacttttttaagagatatacaaaaa
cttattggtgaaaaattaccagttgaaattatggaaggtttcgagccagatccaaatgct
tcaactacacctataaagccaggtcaaaatagacaacccagaaatagcaagcctaaagca
aaaggttctggagataaatctaaagggaattctaactctgaaaatggaggtggaagaaac
cgtagtaaaaataaaagtagaggttctagtagcgataggcgttctagtagttcaagaagt
taa
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