Lacinutrix sp. Bg11-31: CW733_02570
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Entry
CW733_02570 CDS
T05225
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
laci
Lacinutrix sp. Bg11-31
Pathway
laci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CW733_02570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laci03019
]
CW733_02570
03400 DNA repair and recombination proteins [BR:
laci03400
]
CW733_02570
Enzymes [BR:
laci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CW733_02570
Messenger RNA biogenesis [BR:
laci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CW733_02570
DNA repair and recombination proteins [BR:
laci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CW733_02570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Phage_rep_O
Ydr279_N
HTH_24
Cas3-like_C_2
WHD_ORC2
DUF5697
HTH_5
CDC24
Motif
Other DBs
NCBI-ProteinID:
AUC81073
UniProt:
A0A2K8XDP8
LinkDB
All DBs
Position
complement(571724..573625)
Genome browser
AA seq
633 aa
AA seq
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MNHPINILERYWKFTSFRPLQEEIINSVLEGEDTFALLPTGGGKSVCFQVPALVKEGICI
VVSPLVALMKDQVQSLQNKGIKAMALTSGISYKELDTRLDNCIYGNYKFLYLSPERLQQD
LVQDRIRQMNVNLIAVDEAHCISQWGNDFRPSYKNIVKLRELQPTVNVIALTASATPEVV
DDTIKELDFINPKVFRQSFSRSNLAYMTFTEEDKLFRLKAILTKNKAASIVYVRNRKATQ
DISNFLESNGFTATFYHGGLTNTEKDKALENWMNNQKQVMVATNAFGMGIDKPDVKTVIH
LNLPESLESYFQEAGRAGRDGNKAFAVILKNKSDELLVRNQFLKVLPQVDFIKLVYRKLS
SYFQVPYGEGQEETFDFNFNRFCKTYGFNTLLAYNAILILDRTSIITLTKLFKNSTQVLF
KVSNNALFSYLETHPQISIIAKSILRTYGGAFEQETKINTTLMAEKASTSEDKIIEALVL
LEKAEIITLKHSKTDAQITYLVPREDEKTINRITKVIKQQNALKEKQVLSVLEYSNNDTI
CKSVQLLSYFEETQVKDCGICSVCITRKPSKKVASADIKKDIIKALEHGELSSRALFERL
SFSEENINTQLKELLEYNIISITKTNKYKLAHI
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcatcctattaacatattagaacgttattggaaattcacctcatttagaccgctt
caagaagaaattattaactcggttttagaaggtgaggacacctttgccttgctaccaaca
ggtggagggaaatcggtttgctttcaagtacctgctttagtaaaagaaggcatttgtatt
gttgtttcgccattagttgccttgatgaaagaccaagtgcaatctttacaaaataagggt
attaaagccatggctttaactagcggaatctcttataaagagctagatacacgcctagac
aattgcatctatggcaattataaatttctttacctttctccagagcgtttgcaacaagat
cttgtacaagatcgtataagacaaatgaatgttaaccttattgctgtggacgaagcgcat
tgcattagccaatggggaaacgactttagaccaagctataaaaatattgttaaactaaga
gaactacaacctactgtaaatgttattgctttaacagcaagcgcaacacctgaagtggta
gacgatactataaaggaactcgattttattaatccaaaagtgtttagacaatcgttttca
aggtctaatttggcttatatgacgtttactgaagaagataaactctttagacttaaagct
atactaacaaaaaacaaagcggcttcaattgtttatgtacgcaatagaaaagcaacacaa
gatatttctaactttctagaaagtaatggttttaccgcgactttctatcatggtggatta
acaaataccgaaaaagataaagctcttgaaaactggatgaacaaccaaaagcaagttatg
gttgccaccaatgcttttggaatgggaattgataaaccagatgtaaaaacagttattcat
ttaaatttaccagaaagtctagaaagttacttccaagaagctggtcgtgctggtcgagat
ggcaacaaagcttttgctgttatcttaaaaaacaagagtgacgaattattggtaagaaat
cagtttttaaaagtgttaccacaagtcgattttattaagttagtgtacagaaaactaagc
agctacttccaagtaccttatggagaaggacaggaagaaacttttgatttcaattttaat
agattttgcaaaacatatggttttaatacccttttagcatataatgcaatccttatttta
gacagaacaagtataattacattaactaaattatttaaaaatagtactcaagtactattt
aaagttagcaataatgcgctatttagctatttagaaacgcatcctcaaataagtattata
gcaaaatctatattaagaacttatggaggcgctttcgagcaggaaactaaaattaacacg
acgttaatggcagaaaaagcgtctacaagtgaagataaaataattgaagctttagtatta
cttgaaaaagccgaaataattactctaaaacattctaaaaccgatgcacaaatcacttat
ttagtgcctcgtgaagatgaaaaaaccatcaatagaattacaaaggttattaaacaacaa
aatgcattaaaggagaaacaggtactatctgttttagagtattcaaataatgataccata
tgcaaaagcgtacaactcctctcctatttcgaagaaacccaagttaaggactgtggtatt
tgttcggtttgtattactagaaagccatcgaaaaaggtagcttcagcagatataaagaaa
gacattattaaagctttagaacatggtgaactatcatcgagagcattgtttgaacgtctt
agtttttccgaagaaaacattaacacgcaattaaaagaattgttagagtacaatattatt
agtattacaaaaacaaacaagtacaaattagcacatatataa
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