Lacinutrix sp. Bg11-31: CW733_09280
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Entry
CW733_09280 CDS
T05225
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
laci
Lacinutrix sp. Bg11-31
Pathway
laci03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
laci00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CW733_09280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
laci03021
]
CW733_09280
03400 DNA repair and recombination proteins [BR:
laci03400
]
CW733_09280
Enzymes [BR:
laci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CW733_09280
Transcription machinery [BR:
laci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CW733_09280
DNA repair and recombination proteins [BR:
laci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CW733_09280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF4249
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
AUC82311
LinkDB
All DBs
Position
complement(2070027..2071019)
Genome browser
AA seq
330 aa
AA seq
DB search
MAVFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSIRIE
GVDHEFSAIAGVVEDVTEIILNLKQMRFKRQIEDVDNESVSISISGQDKITAGDFQKFIS
GFQVLNSDLVICNLDPKVSITMEITIEKGRGYVPAEENKKASAPIGTIFTDSIYTPIKNV
KYSIENYRVEQKTDYEKLVFEIQSDGSITPQDALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVNVKGLNFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatttaattttcagaagcctgataaagtaatcatgattgattctactgatttc
gaaggtaaattcgaattcagaccactagaaccaggttacggattaacagtaggtaatgct
cttagaagagttttattatcttctttagaaggatttgcaattacatctattagaatagaa
ggagttgatcacgaattttcagcaattgctggagtcgtagaagatgtaacagaaattatt
ttgaacttaaaacaaatgcgttttaaacgtcaaatagaagatgtagataacgaatctgtt
tctatttctatttcaggtcaagataaaattacagcaggtgattttcaaaaatttatttca
ggatttcaagttttaaattcagatttagttatttgtaatttagatcctaaagtaagtatt
acaatggaaattacaattgaaaaaggaagaggttatgttcctgcagaagaaaataagaaa
gcttcagcaccaataggaacaatttttactgattcaatatacacaccaataaaaaatgtt
aagtatagcattgagaattaccgtgtagagcaaaagacagattacgaaaaattagttttc
gaaatccaatcagatggttctattacacctcaagatgctttaactgaagcagcaaaaacg
ttaattcaccacttcatgttattctctgatgagcgtatcactttagaagctgatgaaatc
gctcaaacggaaacttatgatgaagaatctcttcacatgagacagttacttaaaactaag
ttagtagatatggatttatctgtacgtgcgcttaactgtttaaaggctgcagaagtagat
actctaggagacttagtatcttttaataaaaatgacttaatgaagttccgtaacttcggt
aagaaatctttaactgagcttgaagagcttgtaaatgtaaaaggtttaaatttcggaatg
gacttatcaaaatacaaattagataaagattaa
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