Lacinutrix sp. Bg11-31: CW733_14050
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Entry
CW733_14050 CDS
T05225
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
laci
Lacinutrix sp. Bg11-31
Brite
KEGG Orthology (KO) [BR:
laci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
laci03016
]
CW733_14050 (truB)
Enzymes [BR:
laci01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CW733_14050 (truB)
Transfer RNA biogenesis [BR:
laci03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CW733_14050 (truB)
Prokaryotic type
CW733_14050 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SAM_PNT
DUF5381
Motif
Other DBs
NCBI-ProteinID:
AUC83194
LinkDB
All DBs
Position
complement(3125767..3126489)
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AA seq
240 aa
AA seq
DB search
MTVEDYQTGQVLLIDKPLNWTSFQVVNKLRWEIRQAFNIKKIKVGHAGTLDPLATGLLII
CTGKMTKQIDTFQGQVKEYTGTITLGGTTPSFDLESEINETFPTKHITEDLIHETTKQFI
GEIDQFPPVFSALKKDGKRLYEYARAGEAVEIKSRKITINEFEITKIDASTALSTSSINV
GFRVICSKGTYIRSLANDFGKALNSGGHLSALRRTKIGDFHVDNALSKEDFIAALPQKTE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgaagactaccaaactggacaagttttacttatagacaaacctttaaactgg
acctcttttcaagtggttaacaaattgcgttgggaaatacgtcaagcgtttaacattaag
aaaataaaagttggtcatgcaggaactttagatcctttagcaactggattgctaataatt
tgcactggaaaaatgaccaagcaaatcgatacgtttcaaggtcaagttaaagaatacaca
ggaaccattactttaggaggaactacaccttctttcgatttagaatcggaaataaacgaa
acctttccaacaaaacatattactgaagatttaatacatgaaactacaaaacagtttata
ggagagatagaccaatttccacctgtattttctgcactaaaaaaagacggaaaacgcttg
tatgaatatgcacgagcaggagaagctgttgaaataaaatcacgaaaaataactataaat
gagttcgaaatcactaaaattgatgcttcgactgcgctcagcacaagttctattaatgtg
ggttttagagttatttgtagcaaaggcacatatattcgttcgttagcaaacgactttgga
aaagctttaaactctggcggacatctttcagctttaagacgtacaaaaattggtgatttt
catgttgataatgcactttcaaaagaagactttatagctgctttaccacaaaaaacggaa
tag
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