Lactococcus protaetiae: FLP15_00260
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Entry
FLP15_00260 CDS
T06341
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lack
Lactococcus protaetiae
Brite
KEGG Orthology (KO) [BR:
lack00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lack03019
]
FLP15_00260
Messenger RNA biogenesis [BR:
lack03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FLP15_00260
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QDK69886
UniProt:
A0A514Z5L3
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All DBs
Position
complement(52285..53229)
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AA seq
314 aa
AA seq
DB search
MVLIKNLELGEFFEGFYLIKSVELRQTRAGKDYLAISFQDRTGTISGNIWDANNKAVEQF
RAGKVVHMKALKELYNGMPQVNKIQLRLATDSEPNNPKDYREKSPVNETDLREYVQSIVF
KIENGTWNRIVRSILKKFDKEFYEFPAAKTNHHAFEGGLAYHTTTMLQLAEKICEVYPQL
NSSLMFAGVLLHDMAKCLEFTGFENTSYTLRGNLLGHIVLIDEEVSKAALELGIGDEKED
LLLLRHCLLSHHGELEYGSPIRPQIMEAEMIHQIDMMDASMMMMETATANLEPGQFSQRV
WALDNRNFYKPKID
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggttctcatcaaaaacttagaattaggcgaattttttgaaggtttttacctcatcaaa
tcggtcgaactcaggcaaacaagggcgggtaaagattatctggctatcagttttcaagac
cgcacaggaacaatctctggtaatatctgggatgccaacaacaaagcagtagaacagttc
cgggcagggaaagttgttcacatgaaggcgctcaaagagctttacaatggaatgccacag
gtcaacaagattcagctgcgcttagccacagatagtgagccaaataatcccaaagattac
cgagaaaaatcaccagtcaacgaaactgatttgcgtgaatacgttcaatccattgttttc
aagattgaaaatggtacttggaatcgaattgttcgcagtatcctaaagaaatttgataaa
gaattttatgagtttccagcggcaaaaacaaaccatcatgcctttgaaggcggccttgcc
tatcacacgacgacaatgctccaattggcagaaaaaatctgtgaagtttatccacaacta
aattcatcgcttatgtttgcgggtgttttgttgcatgacatggcaaaatgtcttgaattt
acaggatttgaaaatacaagttacactcttcgaggaaatcttcttggacatattgtcttg
attgatgaagaagtaagtaaggcagcacttgaactaggaattggtgatgaaaaagaagat
ttacttttgcttcgccattgcctgcttagccatcacggcgaactggaatacggcagtccg
attcgtccacaaatcatggaagccgaaatgattcatcagattgatatgatggacgcaagc
atgatgatgatggaaacggcgacagctaacctagaaccaggacaatttagtcagcgtgtt
tgggcgcttgataatcgtaatttctataaaccaaaaatagattaa
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