Lactococcus protaetiae: FLP15_00980
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Entry
FLP15_00980 CDS
T06341
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lack
Lactococcus protaetiae
Pathway
lack03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lack00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FLP15_00980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lack03021
]
FLP15_00980
03400 DNA repair and recombination proteins [BR:
lack03400
]
FLP15_00980
Enzymes [BR:
lack01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FLP15_00980
Transcription machinery [BR:
lack03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FLP15_00980
DNA repair and recombination proteins [BR:
lack03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FLP15_00980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QDK70008
UniProt:
A0A514Z5Z4
LinkDB
All DBs
Position
complement(214617..215555)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPKITKFDESENYGKFVVEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIQIEGVQ
HEFATIPGVREDVIQIVLAIKGIAIKSYVESEKQIELDVTGPMTVTAGDILTDSDIEIVN
KDHYLFSIAEGHSMRAVMTVKKGYGYVPADENKVDGAPIGTIAVDSIYTPVSKVNYQVEP
ARVGGDSSYDKLTLEITTNGTIVADEALSLSAKILTDHLNLFVDLSEVAAEAETLVVKDE
VKTERVLDKIIEEMDFSVRAYNGLKRAGINTVADIVEMSEADMIKVKNLGHKSVEEVKVK
LTELGLSLKKRK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaaaaattactaaatttgacgaatcagaaaattacggtaag
tttgttgttgaaccacttgaacgtggctacggtacaactttaggcaactctcttcgtcgt
gttcttttgtcatcacttcctggtgctgctgtgacttcaattcaaattgaaggtgttcaa
cacgaattcgcaacaatcccaggcgtacgtgaagatgttatccaaatcgttcttgcgatt
aaaggaattgctatcaaatcttacgtagaatctgaaaaacaaatcgaacttgacgtgact
ggtcctatgactgttactgctggtgatatcttaacagatagcgacattgaaattgtcaat
aaagaccattacttgttctctatcgctgaaggtcactcaatgcgtgctgtaatgactgtt
aaaaagggttatggctatgttcctgctgacgaaaataaagttgacggagcgccaatcggc
actattgctgtagactcaatttacacgccagtaagtaaagtaaactatcaagtagaacct
gcccgtgttggtggagattctagctacgataaattaacgcttgaaattactactaacggt
accatcgttgctgacgaagctttgtcactttctgcaaaaatcttgacagaccacttgaat
ctgtttgttgatttgtcagaagttgctgctgaggctgaaacacttgttgttaaagatgaa
gtgaaaacagaacgtgtacttgataaaatcatcgaagaaatggacttctcagttcgtgct
tacaatggtttgaaacgtgccggtatcaatacagttgctgatattgttgaaatgagcgaa
gctgacatgattaaagtcaagaacctcggtcacaaatcagtagaagaagtcaaagttaaa
ttgactgaattgggactttcccttaaaaaaagaaaataa
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