Lactococcus protaetiae: FLP15_08915
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Entry
FLP15_08915 CDS
T06341
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lack
Lactococcus protaetiae
Brite
KEGG Orthology (KO) [BR:
lack00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lack03009
]
FLP15_08915 (rlmD)
Enzymes [BR:
lack01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FLP15_08915 (rlmD)
Ribosome biogenesis [BR:
lack03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FLP15_08915 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_15
Methyltransf_31
TRM5-TYW2_MTfase
Cons_hypoth95
MTS
PrmA
Motif
Other DBs
NCBI-ProteinID:
QDK71253
UniProt:
A0A514Z9K1
LinkDB
All DBs
Position
complement(1863304..1864683)
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AA seq
459 aa
AA seq
DB search
MDMINFKKNEIFEADVIDLTHEGQGVVKIEHFPFFVDNALPGERIMMRVLKVGKSFGFGR
VEQFLTQSEHRVNGVNLDYLRTGIADFGHLSYEEQLKFKQKQVCQLLTKTAHKEKFPVSN
VIPADRTLAYRNKAQVPVRDIDGLLTTGFFRKNSHTLIPVENFYIQAPEIDAVILFLRDE
FRKITVSSYDEKTRQGWLRNIVVRKAYYSSEIMITLVVTADKLPKGTDRLLSALTEKFPN
IKSVQLNINADTGSFILGKKFKVLYGQGYITDTMLGKTFQISAPAFYQVNTEQAEKLYQI
AYDFADLKATDVVIDAYSGIGTIGIGMADKVHQIYGMEVIPEAVSDAKHNARLNNLSNTH
YEVGTAEAILPKWLKAGIKPDIVFVDPPRKGLDETFIRAASETQARAIIYISCNPATFAR
DVVRFEEQGYQLDKVQPVDLFPQTHHIELVANFIKTSAC
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggacatgataaatttcaaaaaaaatgaaatatttgaggcggatgtgattgacttaact
cacgaaggacagggtgtagttaagattgagcattttcctttttttgtagataacgcactt
cctggtgagcgcattatgatgcgtgtcttaaaagtcggaaaatcttttggtttcggacgt
gtagagcaatttttaacacaaagtgagcatcgtgtgaacggtgttaatttggattatttg
cggacaggaattgctgattttggtcatctttcgtacgaagaacaacttaaatttaaacaa
aaacaagtctgtcagttactgacaaaaacagcgcacaaagaaaaatttcctgtcagcaac
gttattcctgctgacagaacactcgcttatcgtaacaaagctcaagtgcccgttcgcgat
attgatggtcttttgaccacaggatttttcagaaaaaattcacatacactgattccagtt
gaaaatttttacattcaagcgcctgagattgatgctgtcattttatttctacgtgatgaa
tttcgcaagattactgtcagcagttatgatgaaaaaacacgtcagggctggctacgcaat
atagtcgtcagaaaggcgtattatagctctgagataatgattacacttgtcgtaaccgct
gacaagttaccaaaagggactgaccgacttctgtcagcactgacagaaaaatttcctaat
atcaaatctgtccaacttaatataaatgctgacacaggctctttcattttaggcaaaaaa
ttcaaagtgctttatggtcaaggatatatcactgatacaatgcttggcaaaacttttcag
atttcagcgccagctttttatcaggtcaatacggaacaagcagaaaagctgtatcaaatt
gcctatgattttgctgacttgaaagcgacggatgttgttattgatgcttattcagggatt
ggaacaattgggattggaatggcagataaagtccaccagatttatggaatggaagtgatt
ccagaggctgtgagtgatgcaaaacataatgctagactcaacaatctgagtaatactcat
tatgaagtaggaacggcagaagcaattcttccaaaatggctcaaagcggggattaaaccc
gatattgtctttgttgacccacctagaaaaggacttgatgaaacttttataagagcggct
tctgagactcaagcacgagcaattatatatatttcttgtaaccctgccacctttgcgcgt
gatgttgttcgttttgaggaacaaggctatcaattagacaaagttcagcctgttgacctc
ttcccgcaaactcatcatattgaactagtagcaaattttattaaaacaagtgcgtgctag
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