Lactococcus protaetiae: FLP15_12030
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Entry
FLP15_12030 CDS
T06341
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lack
Lactococcus protaetiae
Pathway
lack03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lack00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FLP15_12030 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lack03019
]
FLP15_12030 (recQ)
03400 DNA repair and recombination proteins [BR:
lack03400
]
FLP15_12030 (recQ)
Enzymes [BR:
lack01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FLP15_12030 (recQ)
Messenger RNA biogenesis [BR:
lack03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FLP15_12030 (recQ)
DNA repair and recombination proteins [BR:
lack03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FLP15_12030 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QDK71766
UniProt:
A0A514ZB04
LinkDB
All DBs
Position
2548313..2550091
Genome browser
AA seq
592 aa
AA seq
DB search
MNLEEKLKEIFGYDNFRKGQKQIIEQVLSKQDTLGILPTGAGKSICYQLPAVIQSGVTLV
ISPLISLMKDQVDQLNVAGIPATFINSTIDDFESNFRMQQVENGAIKLLFVAPERFGLDY
FNHFLQHLPIDLVAIDEAHCISQWGHDFRPSYVEFAQHLQDLPTHPTILALTATATPRVT
EDIQNLLSITPYNTVKTGFLRKNLRFEVVKGVDKRTFLKNYLKNREKGESGIIYASTRKE
VEEICEWLNRNNFKASRYHAGLSENERKTNQEQFIYDEIPIMVATNAFGMGINKSNVRFV
IHYSIPATIESYYQEAGRAGRDGLESDAILLFSPNDVRIRNFLIERSEGDDSHKEHEYEK
LRQMQAYTSSETCLQRYILEYFGDEGQACGKCSNCLDEREDVDITVETQKVLSCVIRMGE
RFGKTAVAQVLVGSKNKNLAKWNFEKLSTFGIMKNFSQKAVGELIDFLAAEGFLNVTAGK
FPTLIVSNRGAKVLKGQEKVHRRATLIAEKTVIHSEAFDAELFEDLRVLRLEIAKRESVP
PFMIFSDASLKDMARLQPIDDTNFLQISGVGPVKLEKYGFLFINKIKEYKKS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaagaaaaactcaaagaaatctttggatatgacaatttccgaaaaggacaa
aaacaaattattgagcaggtgctttccaaacaggatacgcttggtattttgccaacgggt
gctgggaagtcaatttgctatcaactgcctgcagtgatacagtctggcgtgactttagtc
atctcgcctttgattagcttgatgaaagaccaagtagaccagctcaatgttgcaggtatt
ccagcgacttttatcaattcaacgattgacgattttgagtctaattttagaatgcaacaa
gtcgaaaatggtgcaatcaaattactttttgttgcacctgaacgatttggtttagactat
tttaatcattttttacaacatttacctattgaccttgtggctattgatgaagcccactgt
atttcacaatggggacatgattttagaccaagttatgttgaatttgcccagcatttgcaa
gatttacccactcatccaacgattttagcattaacagccaccgccaccccaagggttacc
gaagacattcaaaatctcctctctatcactccttacaatactgtgaagactggatttctt
cgtaaaaatttaagatttgaagtggttaaaggtgtcgataaacgtactttcctaaaaaat
tatctcaaaaatcgagaaaagggtgagtcgggtattatctatgccagtaccagaaaagag
gttgaagaaatctgtgagtggctcaatcgcaataactttaaggcaagtcgttatcatgca
ggtcttagtgaaaatgaacgaaaaaccaatcaggaacaattcatttatgatgaaattccg
attatggttgcaaccaatgcgtttggaatggggattaataagtccaatgtccgctttgtc
attcattacagtatccctgcaacgatagaaagttattatcaagaggcaggacgcgctgga
cgggacggtcttgaatccgatgcaatcctccttttttcacctaatgatgtccgaattcgc
aattttttgattgagagaagtgaaggtgatgactctcataaagagcacgaatatgagaaa
ctgcgtcagatgcaggcatatactagctctgaaacttgtttacaacgatatattttggag
tattttggcgatgaagggcaagcttgtggaaaatgtagtaattgtttagacgagcgtgag
gatgtagatattactgttgaaactcaaaaagtgctctcttgtgtgattcggatgggcgag
cgatttgggaaaactgctgtggcacaagtgcttgtcggctctaaaaataaaaatcttgct
aaatggaattttgaaaaattatctacttttggtattatgaaaaacttctctcaaaaagct
gtgggtgagttgattgactttttagctgctgagggctttctcaatgtgactgctggaaaa
tttccaacacttatcgtttcaaataggggagcaaaggtgcttaaaggtcaggaaaaagtt
catcgtcgtgcgactttgattgcagaaaagactgtcattcattctgaagcgtttgatgct
gaactatttgaggatttacgtgttctacgattggaaattgcaaagcgtgagtctgtgcca
ccatttatgattttttctgatgctagtttaaaagatatggctagacttcagcctattgat
gatacaaactttcttcaaataagcggagtgggacctgttaaacttgaaaaatatggtttt
ttatttatcaataagattaaagaatataaaaaaagctga
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