Lactococcus sp. NH2-7C: QJV49_00410
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Entry
QJV49_00410 CDS
T10489
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lacn Lactococcus sp. NH2-7C
Pathway
lacn03420
Nucleotide excision repair
lacn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lacn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QJV49_00410 (pcrA)
03430 Mismatch repair
QJV49_00410 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lacn03400
]
QJV49_00410 (pcrA)
Enzymes [BR:
lacn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QJV49_00410 (pcrA)
DNA repair and recombination proteins [BR:
lacn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QJV49_00410 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
QJV49_00410 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
WGV30479
LinkDB
All DBs
Position
77994..80270
Genome browser
AA seq
758 aa
AA seq
DB search
MNPLLQGMNEKQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMVNPWNILAITF
TNKAAKEMRERALSLTPRAQDTLIATFHSMCVRILRRDADHIGYNRNFTIIDPGDQKSLM
KRILKEANLDPKKWEPKGILNAISNAKNDLLDESAYEAQTSARNPYEMVVARVYKIYQKE
LRKAESMDFDDLIMQTLRLFDENPDVLSYYQGKFQYIHVDEYQDTNHAQYQLVKLLASRF
QNICVVGDADQSIYGWRGADMQNILDFEKDYPKAKVVLLEENYRSTKTILDAANNVIKNN
LKRRPKELWTQNDTGDKIVYFRAGNEQEEANKVSEIITSGVRSGRSYADYAVLYRTNAQS
RTIEDSFVKSNIPYTMVAGTKFYSRKEIRDVIAYLNVVANPADNMSFERIVNEPKRGVGP
GALEKLRRFADSRGLSLADSSFDIMLSDIRGKAAGEIYNLAMSFDLLRTHSESSTITELV
EEMLERTGYVKALQMVPSIENQARIENIEEFLSVTKGFDEKSEIPLDEETGEPINETGLD
KLSRFLNEVSLLSETDAYEEESEKVTMMTLHAAKGLEFPIVFLIGMEENIFPLSRVNEDI
DELEEERRLAYVGITRAEETLYLMNANQRVLYGKTNYNRPSRFISEIDDELLDYTGIARK
ANSSFNASYKSGGFASGISMSDALHQRKAVINPTVAQATINNSETEDWQIGDTAIHRKWG
EGMVLGISGSGKNMELKINFPEVGMKRLLAAMAPIEKK
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaatccattattacaaggaatgaacgaaaagcaagcagaagcggtccaaactacagaa
ggaccattattaattatggctggggcaggttcaggtaagacccgtgttttaacacatcga
attgcttatttaattgatgaaaaaatggtaaatccttggaatattttagcgattaccttt
acaaataaagcggcaaaagaaatgcgagagcgtgcattatcacttactccaagagcacaa
gatacattaattgccacttttcactcaatgtgtgtacgaattttaagacgcgacgctgac
catattggttataatcgtaattttacaattattgaccctggtgaccaaaaatcattgatg
aaacgaatcttgaaagaagccaatttagatcctaaaaaatgggaacccaaagggattttg
aatgcgatttcaaatgctaaaaatgatttgttagatgaatcagcttatgaagctcaaaca
agtgctaggaatccatatgaaatggttgtggcccgtgtttataagatttaccaaaaggaa
ctacgaaaagcagaatcaatggattttgatgatttaatcatgcagacattacgtcttttt
gatgaaaatccagacgttctttcttactatcaaggaaaatttcaatatattcatgttgat
gagtatcaagatactaaccatgctcaatatcagttggtcaaacttttagccagtcgtttt
caaaatatctgtgtcgttggggatgctgatcaatcaatctatggttggcgtggagcagat
atgcaaaatatattagattttgaaaaagactatcccaaagctaaagttgttttgcttgaa
gaaaattaccgctcaacaaaaacaattcttgacgcggcaaacaatgttataaaaaataat
ttaaaacgtcgaccaaaagaactctggacacaaaatgatactggagataagattgtttat
ttccgcgctggaaatgaacaagaagaagcaaataaggtttctgaaattatcacatcaggc
gttcgttcggggcgttcttatgctgactatgctgtactttatcggactaatgctcagtct
cggacaattgaagattcttttgttaaatctaatattccctatacaatggttgcgggaaca
aaattctactcacgtaaggaaattcgtgatgtcattgcctatttgaacgtagtagcaaat
ccagcggataatatgagttttgaacgaattgttaacgaacctaaacgaggagttggtccg
ggggcattagaaaaattacgtcgttttgctgatagtcgtggcctttctttagcagattca
agttttgatattatgttgtccgatattcgtggaaaagcggcaggtgagatttataatttg
gcaatgtcatttgatttgttgagaacgcatagtgaaagttcaacaatcacagaattagtt
gaagaaatgttagagcggaccggctatgtcaaagctttacaaatggtgccaagcatcgaa
aatcaagcacgaattgaaaatattgaagaattcttgtcagtaactaaaggatttgatgaa
aaatcagaaattcctctagatgaagaaaccggagagccaattaatgaaactggtttagat
aagttgagccgtttccttaacgaagttagtttgctttctgaaactgatgcttatgaggaa
gaatctgaaaaagtaacaatgatgactttgcatgcagcaaaagggttggaatttccaatt
gttttcttaattgggatggaagaaaatatttttcctttatctcgggtaaatgaagatatt
gatgagctggaagaagaacgtcgtttggcttatgtaggaattacacgggcagaagaaacg
ctttacttaatgaatgccaatcaacgtgtgctttatgggaaaacgaattataatcgccct
agccgctttatttcggaaattgatgatgaattactagattatactggtattgctcgtaaa
gcaaattcaagcttcaatgcttcctataaatctggtggttttgccagtggaatttcgatg
tctgatgccctacatcaaagaaaagcagtcatcaatccaactgtagctcaagcgacaatt
aataattctgaaacagaagattggcaaattggagatacagctattcaccgtaaatgggga
gaaggtatggtattaggaatttctggttctggtaaaaatatggaacttaaaataaatttc
ccagaagtcggaatgaaacgactattagcagcaatggctccaattgagaaaaaatag
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