Lactococcus sp. NH2-7C: QJV49_00940
Help
Entry
QJV49_00940 CDS
T10489
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lacn Lactococcus sp. NH2-7C
Brite
KEGG Orthology (KO) [BR:
lacn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lacn03032
]
QJV49_00940 (topA)
03400 DNA repair and recombination proteins [BR:
lacn03400
]
QJV49_00940 (topA)
Enzymes [BR:
lacn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QJV49_00940 (topA)
DNA replication proteins [BR:
lacn03032
]
Prokaryotic type
DNA Topoisomerases
QJV49_00940 (topA)
DNA repair and recombination proteins [BR:
lacn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QJV49_00940 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
DUF5091
C1_2
Motif
Other DBs
NCBI-ProteinID:
WGV30579
UniProt:
A0AA49EWW4
LinkDB
All DBs
Position
192211..194343
Genome browser
AA seq
710 aa
AA seq
DB search
MPTSTKSKTKTTTKKKTTRKRVTPGKNLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDL
KKSTMSVDIENDYEPQYINIRGKAPLINSLKKEAKAAKAVYLASDPDREGEAISWHLAHI
LNLPLEEKNRVVFNEITKDAVKNAFKEPRQIDVDLVDAQQARRVLDRLVGYSISPILWKK
VKKGLSAGRVQSIALKLIVDRENEINAFIPEEYWSIDGEFKKGTKKFKASFWGIDGKKHP
LKTNEDVIKVMERLEGPDFNVDKVEKKERRRNAPLPYTTSSMQQDAANKLNFRTRKTMMV
AQQLYEGLTLGSQGHQGLITYMRTDSTRISPVAQSAAHNYIANQFGEKYSKHGSKVKNAS
GAQDAHEAIRPSNVFNTPDTIAKYLDKDQLKLYTLIWNRFVASQMVAAIFDTVKVNLSQN
GVIFIANGSQVKFDGYLRIYNDSDKSNMLPEMEENETVKKANVKPEQHFTQPPARYSEAT
LIKTLEENGVGRPSTYAPTLETIQKRYYVRLSAKRFEPTELGEIVNKLIVEFFPNIVNTE
FTAEMEKDLDEVEEGKRQWIEVVDQFYKPFAKELENAEEGMEKIQIKDEPAGFDCDVCGS
PMVIKLGRFGKFYACSNFPDCRNTKAIVKEIGVKCPLCHEGNIIERKTKKNRIFYGCDRY
PDCEFTSWDKPIGRDCPKSGHFLVEKKVRGGGKQVVCSNDECDYQEEKQK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgccaacttcaactaaaagtaaaacaaaaacaactacaaagaaaaaaacaacacgaaaa
agagtcactccaggtaaaaatctggttattgtcgaatcgccagcaaaagctaaaacaatt
gaaaaatatttaggacgaaactacaaagttgtggcttcagtaggtcatattcgtgatttg
aaaaaatcaaccatgtctgttgatatagaaaatgactatgaacctcaatatattaatatt
cgtggaaaagccccattaatcaactctctcaaaaaagaagcaaaggctgccaaagccgtc
tatctcgcaagtgacccggaccgtgaaggtgaagcaatttcatggcacttagcacatatc
ttaaatcttccgcttgaagaaaaaaatcgagtggtctttaatgaaatcactaaagatgct
gttaaaaatgcctttaaggagccacgtcaaattgatgtggacttagttgatgcccaacaa
gctcgtcgagttcttgaccgtttggtgggttattcaattagtcctattctatggaaaaaa
gtcaaaaaaggactctcagcaggtcgagttcaatctatcgccttaaaactaattgttgat
cgtgagaatgaaattaatgcttttattccagaagagtattggtcaattgatggtgaattt
aaaaaaggaactaaaaaattcaaagcatccttctggggaattgacggaaaaaaacatcct
ttaaaaaccaatgaggatgtcatcaaagtcatggaacgcttagaaggtcctgattttaac
gtagataaagttgaaaagaaagaacgtcggagaaatgctccgcttccttatacaactagc
tcaatgcaacaagacgcggctaacaaacttaactttcgtacccgtaaaacaatgatggtt
gctcaacaactttatgaaggtcttactttaggaagtcagggtcatcaaggtttaattacc
tatatgcgtacagactcgacacgtatttctcccgttgcacaaagtgcagctcacaattat
attgctaatcaatttggagaaaaatatagtaaacacggttcaaaagttaaaaatgcctct
ggagcccaagatgcccacgaagcaattcgtccttcaaatgtttttaacactccagacacc
attgctaaatatctagacaaagatcaattaaaactttacacactcatctggaaccgtttc
gtagccagtcaaatggtcgcagctatttttgatactgttaaagtaaatctgtctcaaaat
ggtgttatctttattgctaatggttcacaagtaaaatttgacggttatctgcgaatctac
aatgattctgataaatcaaatatgctcccagagatggaagaaaatgaaactgtcaaaaaa
gcgaatgttaaaccagaacaacatttcactcaaccaccagctagatattccgaagcaaca
ctcatcaagacattggaagaaaatggagtgggacgtccctcaacctatgcgcctacacta
gaaacaattcaaaaacgttactatgtgagattgtcagcaaaacgttttgaacctacagag
cttggagaaattgtcaataagcttattgttgagttcttccctaacattgtaaacactgaa
tttacagctgaaatggaaaaagatcttgatgaagttgaagaaggaaaacgtcaatggatt
gaggttgttgaccaattttacaaaccctttgcaaaagaacttgaaaatgccgaagaaggt
atggaaaaaatccaaatcaaggatgaacctgctggttttgactgtgatgtttgtggaagt
ccgatggtaataaagttgggtcgtttcggaaaattttatgcttgtagcaacttcccagat
tgtcgaaacaccaaagcaattgtcaaggaaatcggtgtaaaatgtccactttgccatgaa
ggaaatattatcgaacgcaaaacaaagaaaaatagaattttctatggttgtgatcgttac
ccagactgtgaattcacaagttgggacaaacctatcggccgtgattgtcctaaatctgga
cattttcttgttgaaaagaaagttcgcggtggcggtaaacaagtggtatgttcaaatgat
gaatgtgattatcaagaagaaaaacaaaaataa
DBGET
integrated database retrieval system
