Lactococcus sp. NH2-7C: QJV49_01475
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Entry
QJV49_01475 CDS
T10489
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lacn Lactococcus sp. NH2-7C
Brite
KEGG Orthology (KO) [BR:
lacn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lacn03400
]
QJV49_01475
DNA repair and recombination proteins [BR:
lacn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QJV49_01475
Archaeal homologous recombinant proteins
QJV49_01475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
AAA_27
SMC_N
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WGV30681
UniProt:
A0AA49EWQ6
LinkDB
All DBs
Position
complement(317649..320789)
Genome browser
AA seq
1046 aa
AA seq
DB search
MKPIYLEMNYFGPHESSVVDFRLLDESPIFLISGDTGAGKSTIFDAMTYALFGTTTGDRD
AKEMRSQFATADDRTSVTFYFEQGNLLYRIERSPEQKLSKKRGSGSTLQKSTAKLAIVDR
VKGIEKNNIAINPKNVGEEINRLLHLNAEQFKKIILLPQNDFSRFLKSSTPDKEAILKRI
FGTYIFTSFSNEIKAKNSEMNAVYLEHDRKQRNLYESSIWNPFELKELEDAAEQEKLDLV
TSLWENRVARKNEIEGQTVEQEEKVTSLEIAYKSALELENQFKNLNNLENDYQQNIIEKS
AIFEQKYEYLKKLKWASPLKESIHELEQDIKQLKSLKSNIAGVISEKAKDEILLKKLTNE
KEELNKQQENINENKKAAEKIFVQIQLSLQVEKKQSKVEELKLEQADNLTLLDSFKANLE
QVAEKFSTLQDDVISDDYFISKREERNQLELTFRGKLIPAFQKVKHSKADIAELELKLKE
NTIALSENEDNLEKAKFVYNEKLKGRRRLMIAQLQSELQEGEACPVCGALEHPFTETIVE
SSYKELGNLLKEIDESQKKQTVLLEKNKQLQQLEAELKSSLDLKKIESDNFDKELSILYS
EFIADYSQIFPNSFDEASIEESLLNLTKSLELEEVKNDETKVKLADLESKKLELQEKVKD
FEYSNQEFNRQIENLIAEITETGIVETSYNLMRKRDKLIEEADLFERHLSELMVQFSDIK
IKISSKTASLNSLESQEATLLERISANKEKIKEKFSEQEAFTTEFQVLKEWAYDDDLIQI
SQEVEQYKADKARLKVEIKNIQQIIQNKKRPNLALIEEQKKQASENYVFLQKKLVSAENE
VEQAKLILDELKRVIKEQNKDASKKVAITKLYNAISGRASEDKLRLETYVVQNYLEKILG
YANLHFINQLSNNRYRFELASEGNNRRMDHGLDINIYDNETGAARSADTLSGGETFIAAL
SIALALSEVVQNTANGVQIEALFIDEGFGSLDQETLQKAMQALEQIGENRLVGVISHVEE
MKATIGQQIIINKMGDGRSNIKAIIK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctatatatttggaaatgaattattttggcccccatgagagttctgtcgtagat
tttagactgctagatgaatctcctatatttttaattagtggggacacaggtgcgggaaaa
tccacgatatttgacgcgatgacatatgctttgtttgggacaacaacgggtgatagagat
gccaaagaaatgagaagtcagtttgctacagctgatgacagaacgagtgtgactttttat
tttgaacaaggaaatcttttgtatagaattgaaagaagccctgaacaaaaactctcgaag
aaacgaggtagtggatcgactcttcaaaaatcaacagcgaaattagctattgtagataga
gtaaaaggaattgagaaaaataatattgcaataaatcctaaaaacgttggagaagaaatc
aatcgtcttttacatctgaatgctgaacaatttaaaaaaataattcttctaccacaaaat
gacttttcgagatttttaaagtcttctactccagataaagaagcaatattaaaaagaata
tttggcacctatatttttacatcttttagtaatgagataaaggcaaaaaattcagagatg
aacgcggtttatttagaacatgatcgaaaacaacgaaatttatatgagtcatcaatttgg
aatccttttgagttaaaagaattagaagatgcagctgaacaagaaaaactggacctggtc
acatctctgtgggagaatcgtgttgcgagaaaaaatgagatagaaggtcaaactgttgaa
caagaagaaaaagtgacttcgctggaaatagcttataaatccgcgttggaattagaaaat
cagtttaaaaatctaaataacttagaaaatgattaccaacagaatattattgaaaagtca
gctatttttgaacaaaaatacgaatatctaaaaaaattgaaatgggcatctcccttaaaa
gagagtattcatgaactagaacaagatataaaacagttaaaaagcttgaaaagtaatatt
gctggggtaatttctgaaaaagcaaaagatgaaattcttttgaaaaaattaacaaacgaa
aaagaggaattaaataaacagcaagaaaatattaatgagaataaaaaagcagcagaaaaa
atatttgtccagattcagctatcacttcaggtagaaaaaaagcaatcaaaggtagaggaa
ttaaagttagagcaagctgataatctcacgctactggacagttttaaagctaacctggaa
caagtagcagaaaagttttcaactcttcaagatgatgttatttctgatgattactttatt
agtaaaagagaggagagaaatcaattagaattaacatttcgaggaaaattaattcctgcc
tttcagaaagtgaaacattcaaaagctgatattgctgagttagaattaaaattaaaagaa
aacacaatagcgctctctgaaaatgaggacaatctagaaaaggccaaatttgtttataat
gaaaaattaaaaggtagaaggcgcttgatgattgcacagttgcaatctgagctgcaagaa
ggtgaagcatgtcctgtgtgtggtgcattagagcatccgtttacagaaactattgtagaa
agctcttataaagaacttggaaatttattgaaagagattgatgaatcacaaaagaaacaa
acagtccttctggaaaaaaataaacagctacaacaattagaggctgaacttaaaagtagt
ctcgatttgaaaaaaatagagtcagataattttgataaagaactttcaattctttatagc
gaatttattgccgattattcacaaatatttcccaattcttttgatgaagcatctattgag
gaaagccttttaaatttaacgaaatcattagagctagaagaagtaaaaaatgatgaaaca
aaagtaaagcttgctgatttggagtcaaaaaaacttgaattacaggaaaaagtgaaagat
tttgaatatagtaatcaagagtttaatagacagatagaaaatttaatcgccgaaataacg
gagacagggattgttgagacaagttataatttgatgaggaagcgagataagctaatagaa
gaagctgatttatttgaaaggcatctgtcagaactaatggtacaattttcggatattaaa
ataaaaatttcttcaaaaacggccagcttaaattcattggaaagtcaagaagcgacattg
cttgaaaggataagcgccaataaagaaaaaataaaagaaaaattttctgagcaagaggca
ttcacgacagagtttcaagtattaaaagagtgggcttatgatgatgatttaatccagatt
tcccaagaagtcgaacaatataaagcagataaagcaagattaaaagtcgaaattaaaaat
attcagcaaataattcaaaataaaaagcgaccaaatcttgcattgattgaagagcaaaag
aaacaggcaagcgaaaactatgtatttttgcaaaaaaaactggtatctgcagaaaatgaa
gtagagcaagcgaagttgattctcgatgaattaaaaagagtcataaaagaacaaaataag
gatgctagtaaaaaagttgcaattactaagctttataatgcaatttcaggtagagcttct
gaggataaactaaggcttgaaacatatgtggtccaaaattatttagagaaaattcttggt
tatgctaaccttcattttattaatcagttgtcaaataatagatatcgatttgaacttgct
agcgagggaaataatcggcgaatggatcatggtttagatattaatatttatgataatgaa
acaggggcggctcgttcagccgataccttatcaggtggagagacgtttatagccgcattg
tcaattgctttggctttaagtgaagttgttcaaaatacagctaatggtgtccaaatagaa
gcgctgtttattgatgaaggatttggttctcttgaccaagaaacattacaaaaagcaatg
caagctcttgagcaaattggtgaaaatagattagttggagtaattagccacgtagaggaa
atgaaggcaactattggacaacaaattatcataaataaaatgggggatggtagaagtaat
attaaagctatcattaaataa
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