Lactococcus sp. NH2-7C: QJV49_06520
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Entry
QJV49_06520 CDS
T10489
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lacn Lactococcus sp. NH2-7C
Pathway
lacn03030
DNA replication
lacn03410
Base excision repair
lacn03420
Nucleotide excision repair
lacn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lacn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QJV49_06520 (polA)
03410 Base excision repair
QJV49_06520 (polA)
03420 Nucleotide excision repair
QJV49_06520 (polA)
03440 Homologous recombination
QJV49_06520 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lacn03032
]
QJV49_06520 (polA)
03400 DNA repair and recombination proteins [BR:
lacn03400
]
QJV49_06520 (polA)
Enzymes [BR:
lacn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QJV49_06520 (polA)
DNA replication proteins [BR:
lacn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QJV49_06520 (polA)
DNA repair and recombination proteins [BR:
lacn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QJV49_06520 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QJV49_06520 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DUF2120
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WGV31670
LinkDB
All DBs
Position
complement(1294113..1296746)
Genome browser
AA seq
877 aa
AA seq
DB search
MENKNRLLLIDGSSVAFRAFFALYNQIDRFKAPNGLHTNAIFAFHTMLSSLMERVEPTHV
LIAFDAGKTTFRTEMFADYKGGRSKTPDEFREQLPFIKEMIEKLGIRHYELANYEADDII
GTLDKMAEAPNVNFDVTIVTGDKDMIQLVDGNTRVEISKKGVAEFEEFTPDYLLEKMGLT
PAQFIDLKALMGDSSDNYPGVTKVGEKTGLKLLQEFGSLENLYENVDSLKASKMKENLIA
DKEMAFLSQQLATINTKAPIEIGLDDTLLKGKKVDELSQFYDEMGFAQFKSKLLAEAGGE
VTDEKVVDEIDFEIVTDGSISEKVNADDFFYLETLGENYHREQIVAFAWGNAEKIYVSKN
IDLLTKMKFPENTYDFKKNRVLLSHLDIELPLVKFDAMLAKYLISTTEDNKISTIARLFN
SGHLATDEEIFGKGTKIALPDDEILFEHLARKIKVLALAKEKMMAELVENEQEHLLSDME
LPLAEVLAKMEITGIAVSQNTLEEIGAENEEKLASLTREIYDLAGEEFNINSPKQLGVIL
FEKLQLPVGKKTKTGYSTAVDVLEDLAALSPVVAKILEYRQINKVQSTYVKGLIPQIADD
GKIHTRYVQDLTQTGRLSSIDPNLQNIPVRLEEGRKIRKAFVPSKDSLLLSSDYSQIELR
VLAHISGDEHLIEAFKHGADIHTSTAMRVFGIEKSEDVTANDRRNAKAVNFGVVYGISDF
GLARNLGITRKDAKNYIETYFERYPGIKNYMENIVREARDKGFVETMSHRRRKIPDINAR
NFNVRGFAERTAINSPIQGSAADILKIAMINLDKALSARDFKSKLLLQVHDEIILDVPLE
ELDEIKALVKQTMEEAIELAVPLKVDENTGKTWYEAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaagaacagacttttactaattgatgggtcatcggttgcctttcgagccttt
tttgcactatataatcagatagatcgctttaaagcgccaaatggtttacatactaatgct
attttcgcatttcatacaatgctttcttctttgatggaaagagttgagcccacacatgtt
ttaattgcatttgatgcaggaaaaacaacttttcgtacggaaatgtttgctgactacaaa
ggcggacgttcaaaaacaccagatgaatttcgtgagcaattaccttttatcaaggaaatg
attgagaaattgggaattcgtcattatgagttagctaactatgaggctgatgatattatt
gggactttggacaaaatggcggaagccccaaatgttaattttgatgttactattgtgaca
ggtgataaggatatgattcagcttgtggatggaaatacgcgagttgaaatttctaagaag
ggtgttgctgagtttgaggagtttacacctgattatcttttagaaaaaatgggattgact
ccagcccaatttattgatttaaaagcattaatgggcgattcttctgataattaccctggc
gtgacaaaagttggcgaaaaaactggtcttaaacttttacaagagtttgggtcgcttgaa
aatctttatgaaaatgttgattctttgaaagccagcaaaatgaaagaaaatctaattgct
gacaaagaaatggcctttttgtcacaacaattggcaacgataaatacgaaagctccaatt
gaaattggcttagatgatacgcttttaaaaggtaaaaaggttgatgaacttagtcaattt
tatgatgaaatgggatttgctcaattcaaaagtaaattattggctgaggctggtggagaa
gttactgacgaaaaagttgttgacgaaattgattttgaaatagttactgatggctctatc
agtgaaaaggtaaatgctgatgatttcttttatttggaaactttaggggaaaattatcat
cgtgagcaaattgtggcttttgcctggggaaatgctgagaaaatttatgtttctaaaaat
atagatttactgacaaaaatgaagttccctgaaaatacttatgatttcaagaaaaatcgg
gtacttttgagtcacttggatatcgaattacctttggtcaaatttgatgcaatgcttgca
aaatatctaatttcaacaacagaagataataaaatttcgacgattgcaagacttttcaat
agcggacatttggcaacggatgaagaaatttttggcaaagggacaaaaattgctttacct
gatgatgagattttatttgaacatttagctcgtaagattaaagtgcttgccttggccaaa
gaaaaaatgatggctgaattggttgaaaatgaacaagagcaccttttgtctgatatggaa
ttaccattagcagaagttttagcgaaaatggaaattacagggattgctgttagccaaaat
acactggaagaaattggtgcagaaaatgaagaaaaattggcttctttgacgcgtgaaatt
tatgacttggctggtgaagaatttaatattaattcaccaaaacaattgggcgtgatttta
tttgaaaaattacagctacctgttgggaagaaaacaaaaacgggttattcaacggcagtg
gatgttttagaagacctagctgctttatctcctgttgtagcaaaaattttggaataccgt
caaatcaataaagtgcaatcaacttacgtgaaaggtctgattcctcaaatcgcggatgat
ggaaaaattcatacacgttatgttcaagatttgactcaaactggacgtttgagctcaatt
gacccgaatttacaaaatattcctgttcgacttgaggagggacgaaaaattcgtaaagct
tttgtcccaagcaaagattcgcttctattgagttctgactattcacaaattgaattgcgg
gttttggcacatatttctggggatgaacatttgattgaggcctttaaacatggagctgat
atccatacctcaacggctatgcgtgtttttggtattgaaaaatcagaagatgtgactgct
aatgatcgtagaaatgccaaagcggtcaactttggagtagtctatggaatttccgatttt
ggtttggcacgaaatcttggaattacaagaaaagatgctaaaaactatatagaaacttat
tttgaacgttatcctggaattaaaaactatatggaaaatattgtccgcgaggcacgagat
aaaggttttgttgaaacaatgagtcaccgtcgtcgtaagattccagatattaatgctcgt
aattttaatgttcgtggctttgcggaacggacggctattaattcaccaattcaaggttca
gcagccgatattttgaaaattgcgatgattaatttggataaagccctgagtgcacgtgat
tttaaatcaaaattattattacaagtacatgatgaaattatccttgatgttcctttagag
gaattagatgaaattaaagccttggtaaaacaaacgatggaagaagcgattgaacttgct
gtcccattaaaagtagacgaaaatactggtaagacttggtatgaggctaaataa
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