Lactococcus sp. NH2-7C: QJV49_12315
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Entry
QJV49_12315 CDS
T10489
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lacn Lactococcus sp. NH2-7C
Pathway
lacn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lacn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
QJV49_12315 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lacn02000
]
QJV49_12315 (abc-f)
01504 Antimicrobial resistance genes [BR:
lacn01504
]
QJV49_12315 (abc-f)
Transporters [BR:
lacn02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
QJV49_12315 (abc-f)
Antimicrobial resistance genes [BR:
lacn01504
]
Gene variants
Macrolide resistance genes
Transporters
QJV49_12315 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_15
RsgA_GTPase
AAA_29
ABC_tran_Xtn
AAA_22
MMR_HSR1
AAA_16
DUF5615
AAA_23
Dynamin_N
Ig_NUP210_15th
efb-c
Motif
Other DBs
NCBI-ProteinID:
WGV30266
LinkDB
All DBs
Position
2467115..2468695
Genome browser
AA seq
526 aa
AA seq
DB search
MSNIEFKDLTFGYGDNLIFNHAQINIDDRWKLGLVGRNGRGKSTLLNLLQGKLTTDSTIL
TDKNFVYFPQLLTEEELIDENNFKNQNVHDDPSVESLSVKITDRKSQLTYYVLNELAEFE
QWKLERELSLLKVDLEILWRPFESLSGGEQTKCLLAILFLDEANFPLIDEPTNHLDMESR
KIVAAYLKKKSGFIVVSHDRHFLDQVCDHILAIERQQIILYQGNFSTYEQEKQLRDDFEL
AEDEKLRKDISRLKKTAREKEDWSRNLEATKSRKKRGFDSETKRIDKGFVGRKAANMMQK
SKNLEKRMNQEIFDKEKLLKNIEKTEPLSLKYHASHHKILIQFEKFSLVFDKKPLFQPID
FSLKEGEIAAVVGPNGQGKSSIIKYLSGNFGGKHSGFVQLPQGIKISIVRQIYDNRGYLK
DFATEHQLDYELFLSNLRKLGMERKQFTQKIETMSQGQQKKVELARSLSQEAELYLWDEP
LNYLDVFNHEQIIKLLETSHPTMLLVEHDQDFIERISNQIINLKDT
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatattgaatttaaagacttaacctttggctatggggataacctgattttcaat
catgcccaaataaatattgatgaccgttggaaattaggattagtaggtcgaaatggacgt
ggaaaatcaacccttttaaacttattacaaggaaaactaactactgacagcacgatactt
actgacaaaaactttgtttactttccgcagttactgacagaggaagaattaattgatgaa
aataacttcaaaaatcaaaatgtccatgatgacccttctgtagaaagtctgtcagtaaaa
attactgacagaaagtcacaattaacttattatgtgctaaatgaattagctgaatttgaa
caatggaaattagaacgtgaattatctttattgaaagttgatttagaaatcctttggcgc
ccttttgaaagtttatcaggtggggaacaaaccaagtgtctcttggcaattttattttta
gatgaggccaattttccactaattgatgaaccaacaaaccatctagatatggaaagcaga
aaaatagttgcggcctatcttaaaaagaaatcaggatttatcgttgtatcgcatgatcga
cattttcttgatcaggtttgtgatcatattttagcgattgaacgtcagcaaataattctt
tatcaggggaatttttcaacttatgaacaagaaaaacagttgcgtgatgattttgagctc
gctgaagatgaaaaattacgtaaagatatatcacgattgaaaaagacagccagagaaaaa
gaagattggtcgagaaatctagaagctacaaaatctagaaaaaaacgtggttttgatagt
gaaactaaacgcattgataaagggttcgtcggtcgaaaagctgcaaatatgatgcaaaaa
tccaaaaatttagagaagaggatgaatcaggaaatctttgataaagagaagttactcaaa
aatatcgaaaaaactgaacctctatctttgaaataccatgcttcacaccataaaatactg
atacaatttgaaaaattttcgcttgtatttgataaaaaaccactatttcaaccgattgat
ttttctttgaaagaaggagaaattgcggctgttgttggaccaaatggtcagggaaaatca
agtattatcaaatatttgtctggaaattttgggggtaaacacagcgggtttgttcaactt
ccgcaagggataaaaatatcaattgttcgtcagatttatgataatcgcggatacctaaaa
gattttgcaactgaacatcagttggattatgagttatttctttctaatctcagaaaacta
ggcatggaacgtaagcagtttactcaaaaaatagaaacaatgagtcaagggcagcagaaa
aaagttgaattagcacgaagcttatcacaagaagcagagctttatctttgggatgaacct
cttaattatcttgatgtttttaatcatgaacagattattaaacttctagaaactagtcat
cccacaatgcttttagttgaacatgaccaagactttattgaaagaatttctaaccaaatt
attaatctaaaagatacataa
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