Lacibacter sediminis: H4075_03945
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Entry
H4075_03945 CDS
T06746
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
lacs
Lacibacter sediminis
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lacs01002
]
H4075_03945
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lacs01011
]
H4075_03945
Peptidases and inhibitors [BR:
lacs01002
]
Cysteine peptidases
Family C82
H4075_03945
Peptidoglycan biosynthesis and degradation proteins [BR:
lacs01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
H4075_03945
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QNA45361
UniProt:
A0A7G5XIQ8
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Position
complement(895842..897476)
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AA seq
544 aa
AA seq
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MLLKTLCSASLLLTVVIAGFTGCKSSNGKDKAFKTDTIPKTQPDITLPGNFSSQTTLKFD
STAIPAFFSKYPKLKPYEKELVTFYSHRKFAYAWFDNKGMIEQAGNLFNKIENISDEGVP
VQILYEEEFHKLMDNDSTESFTEKANSTAELMLTAQYFFYAKKIWSGLDAKAMRATNWDL
PRKKLSYEAFLDSLLEVPSSAFMQTEPVYRQYGLLKSFLKKYRALAESGKWKPIKADKKS
YRLNDSNKIIPEIKEHLYLLGDLKSNNQSPVFDIELENAVKNFQQRYGIKDDGIVGTSML
AELNYPLAKRVEQIIVNMERCRWLPVALKTDYIVINIPEYKFHAYENDSLVWSMNVVVGT
ALNKTAIFNGMMNNVVFSPYWNVPPGIMKNEILPAIRRNKNYLERNHMEWNGNAVRQKPG
PWNALGKVKFLFPNSHSIYLHDTPSKSLFSQDKRAFSHGCIRVEDPRRLAIYVLRHQPEW
TETRIDSSMNAEKEQYVKIKKPVPVYIAYFTSWVDRDGRLNLRNDIYKRDGRLAEMIIEN
SKLK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcaaaacactttgctctgcatctttacttcttactgttgtaatagctggcttt
accggttgcaaatcatctaacggaaaagacaaagcctttaaaacagatactattccaaaa
acacaacctgacattacattacccggcaatttcagttctcaaacaacactaaaattcgac
agtactgccatacctgccttcttcagcaagtacccgaaactgaagccttatgagaaagaa
ctggtgacattttacagtcatcgcaaatttgcctacgcctggtttgataacaaggggatg
attgaacaggcaggcaacctgtttaataagatcgaaaatatttctgacgaaggtgtacca
gtacaaatattgtatgaagaagagtttcacaaactgatggataatgattcgacagaaagt
tttacggagaaagccaacagtacggccgagttgatgcttacagcacagtatttcttttat
gcaaagaaaatatggagtggcttagatgcaaaagccatgcgtgccaccaactgggatctg
ccccgcaagaaattatcgtacgaagcctttctcgactctctgcttgaagtgccatcatcg
gcattcatgcaaacagagcccgtgtaccgtcaatacggtttattaaaatcatttctgaaa
aaataccgggcacttgcagaaagcggaaagtggaaaccgatcaaagcagataaaaaatcg
taccgactgaacgacagcaacaagatcattcctgaaataaaggaacatctttatttactt
ggtgatcttaaaagcaataatcaatcacctgtatttgatattgagctggagaatgcggtt
aagaattttcaacaacgatatggtattaaagacgatggcattgtgggcacaagcatgctt
gcagaactcaactatccgttggcaaaacgtgttgagcagatcatcgtgaacatggaacgt
tgccgttggttgcctgttgcgttaaaaaccgactacatcgttattaatattcctgagtat
aaatttcatgcttacgaaaacgattcattggtgtggagcatgaacgttgttgttggtacc
gcactaaacaaaacagctattttcaatggcatgatgaataatgtggtgttcagtccttat
tggaatgttccgccgggcattatgaagaatgaaattcttcctgccatccgcagaaacaaa
aactaccttgaacgaaatcacatggaatggaacggtaatgcagttcggcaaaagccaggc
ccatggaatgcattaggcaaggtgaagttcttgttccccaacagtcacagcatttacctg
cacgatacgccatcaaaatcattgttcagccaggataagcgtgctttcagtcatggatgt
attcgtgtggaagatccgagacgtttggccatttatgtgttgcgccatcaacctgaatgg
acagaaacacgtattgattcttcaatgaatgccgagaaagaacaatatgtaaaaatcaaa
aagccagtgcctgtatatattgcttacttcacatcatgggttgatcgtgatggcagatta
aatcttcgtaacgatatttacaaacgtgatggacgattagcagaaatgatcatcgaaaat
tcgaaattgaaatga
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