Lacibacter sediminis: H4075_04055
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Entry
H4075_04055 CDS
T06746
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lacs
Lacibacter sediminis
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lacs03400
]
H4075_04055
Enzymes [BR:
lacs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
H4075_04055
DNA repair and recombination proteins [BR:
lacs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
H4075_04055
Prokaryotic type
H4075_04055
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Phosphoesterase
Motif
Other DBs
NCBI-ProteinID:
QNA45382
UniProt:
A0A7G5XIS9
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All DBs
Position
919223..920533
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AA seq
436 aa
AA seq
DB search
MAKQQVNICWFRRDLRLHDNAALYHSLKDGLPVVPIFVFDKAILDKLDDKNDRRVEFIHH
AIADMQQQLQSMGSSMEVYYGVPSDAFRKLAGKYSINKVFTNHDYEPYAQERDAAIQQQL
NDAGISFHTYKDQVIFEKDEVLKDDGKPYTVFTPYSRKWKAKLNDFYLKSYPVEEYTTNF
FKQSPVAIPSLKEMGFEAVGLPFPSAETRKEIIKKYKEQRDFPAIDGTSRLSVHLRFGTI
SIRDLAREAQGLSEGFLNELIWRDFYHMILWHFPQVGEGKAFKKEYDFIEWRHDENDFQK
WCDGQTGYPIVDAGMRELNATGFMHNRVRMIVASFLTKHLLLDWRWGEAYFAKKLLDFDL
AANNGGWQWAAGSGCDAAPYFRIFNPYLQTQKFDPKLQYIRKWVPEFEGFDYVKPIVQHE
LARKRCLEVYSKALKK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaacaagtaaatatctgctggttcaggagagatcttcgattgcatgataat
gcagctttgtatcattcattgaaagatggcttgcctgttgtgcccatttttgtttttgat
aaagccatcctggataaactggatgataagaacgatcgacgtgttgagtttatccaccat
gctatagcagatatgcaacagcaattgcaaagcatgggcagcagcatggaagtgtattat
ggggttccatcagatgcgtttcgtaagctagctggaaaatattcaatcaataaagtattt
accaatcatgattatgaaccctatgcacaagaacgggatgcagcaattcagcagcaatta
aatgatgctggaatatcctttcatacgtataaagaccaagtgatctttgaaaaagatgaa
gtgttgaaagatgacggcaaaccttacacggtttttactccttacagcagaaaatggaaa
gccaaactcaatgatttttatttaaagagctatccggttgaagagtacacaactaatttt
ttcaaacagtcaccggtagctattccttcattaaaggaaatgggttttgaagcagttggc
ttaccattcccttctgcagaaacaagaaaagaaattatcaaaaaatataaagagcaacgg
gattttcctgcaatagatggtactagccgattgagtgtgcatttacggtttggcacaatt
agcattcgtgatttagcaagagaagcacaaggattaagcgaaggttttttaaacgaattg
atctggcgtgatttctatcatatgatcctttggcatttcccacaagtaggagagggcaaa
gcattcaaaaaagaatatgattttattgaatggcggcatgatgaaaatgattttcagaaa
tggtgcgatggacaaacaggttatcctattgttgatgcgggtatgcgtgaactcaatgct
accggttttatgcacaatcgtgtgcgaatgatcgttgcatcatttcttaccaaacatttg
ttgctcgattggcgatggggcgaagcttatttcgcaaaaaaattattggactttgacctt
gctgccaataacggcggttggcaatgggcggcagggagtggttgcgatgcggcaccttat
ttccgcatcttcaatccgtatttgcaaacgcagaagtttgatccgaagttgcaatacatc
cgcaagtgggttcccgagtttgaaggatttgattatgtaaaaccaattgtgcaacatgaa
cttgcacgtaagcgttgcctcgaagtgtacagcaaagcattaaagaagtaa
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