Lacibacter sediminis: H4075_06300
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Entry
H4075_06300 CDS
T06746
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lacs
Lacibacter sediminis
Pathway
lacs00521
Streptomycin biosynthesis
lacs00523
Polyketide sugar unit biosynthesis
lacs00525
Acarbose and validamycin biosynthesis
lacs00541
Biosynthesis of various nucleotide sugars
lacs01100
Metabolic pathways
lacs01110
Biosynthesis of secondary metabolites
lacs01250
Biosynthesis of nucleotide sugars
Module
lacs_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
H4075_06300 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
H4075_06300 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
H4075_06300 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
H4075_06300 (rfbB)
00525 Acarbose and validamycin biosynthesis
H4075_06300 (rfbB)
Enzymes [BR:
lacs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
H4075_06300 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
NmrA
KR
Sacchrp_dh_NADP
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QNA45805
UniProt:
A0A7G5XK02
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Position
1451565..1452629
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AA seq
354 aa
AA seq
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MSTFDKTILVTGGAGFIGSHVIRLFVNKYPNYKIVNGDALTYAGNLENLKDVQDKPNYAF
AKIDITDEAGVEQLFNQYHFDAVIHLAAESHVDRSILDPLAFVKTNVLGTAILLNACRKH
WAGNHEGKLFYHVSTDEVYGSLGETGFFTEETPYDPHSPYSASKAASDHFVMAYHDTYGL
PVVMSNCSNNYGSHHFPEKLIPLMINNIKNNKPLPVYGKGENVRDWLFVEDHARAIDTIF
HNGKLGASYNVGGFNEWKNIDLVHLLCSIMDKKLGRAAGESAKLITYVKDRAGHDLRYAI
DATKLNKELGWSPSLQFEEGLEKTVDWYLSNEEWINHVTSGDYQKYYDAQYEKR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagcacattcgacaaaacaatattggtaacgggcggagccggctttatcggcagtcat
gtaattcgcctgtttgtaaataaatatcccaattacaaaattgtaaatggcgatgcattg
acctacgcaggcaacctggagaatctgaaagatgtacaggataaaccaaactatgcattt
gcgaaaattgatattacagatgaagcaggtgttgaacagctcttcaatcagtatcatttt
gatgcagtgattcacctggcagcggaaagtcatgttgaccgcagcattcttgatccattg
gcatttgtaaaaacaaatgtattgggtactgctatattactgaatgcatgtcgcaagcat
tgggctggtaatcatgaaggcaaattgttctatcatgtatcaactgatgaagtatatggt
tccttaggcgaaacaggcttctttactgaagaaaccccttatgatccgcattctccttac
tcagcatcgaaagctgcgtctgatcattttgtaatggcgtatcatgatacgtatggtctg
ccggtggtgatgagcaactgcagtaacaactatggatcacatcatttcccggaaaaatta
attccgttaatgatcaacaatatcaaaaacaacaaaccgctcccggtttatggtaaaggc
gagaatgtgcgtgattggttgtttgtagaagatcatgcaagagcgatcgatacaattttc
cataacggaaaacttggagcaagctataatgtgggcggcttcaacgaatggaaaaatatt
gatctcgttcacttgctttgcagcatcatggataaaaaacttggtcgggcagcaggtgaa
agcgcaaagctcatcacttatgtaaaagatcgtgctggtcatgatttgcgttatgccatt
gatgcaaccaaactcaataaggaattaggctggagtccttctttacaatttgaagaagga
ttggagaaaaccgttgactggtatttgagtaatgaagaatggatcaatcacgtaacaagc
ggcgattaccagaagtactatgatgcgcaatatgaaaaaaggtga
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